Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1339 ATGAGACCTAACTTGGATCTTGAAGTGGAGGCTTCTGCGGAAAATGAATCTGAAATTAGCAGCCAGGTTGCATCCGACATATTCATTCATGAAATATCTGCAGATCCTTCTAGTGACAGCCTCAACAATGCATCAGACAACACAAACACCATAGGATTTCAACTAAATAATGCAGATCCTCTTTCATTTGACTTAACTCTCAGCTTCAATAACAACGAGCTAGGCCGCGTCGGAGAATCCATAGGACTCTCATTCTCAAGCACCAGTGAGAGTAGCAACGAACCTGCCTCTCAAACTACTTCAGCCACCATCCAAAGAGTCTTCTCTTGCAACTACTGTCAGCGCAAGTTCTTCAGCTCGCAGGCTCTCGGTGGCCACCAGAATGCACACAAGAGGGAAAGAACACTAGCAAAGAGAGCTATGAGAATGGGGTTTTTCTCTGATAGGTATGCAAGTTTAGCATCCCTCCCTCTTCATGGCTCCTTCAGGTCCTTAGGAGTAAAAACACACTCCTCACTTCACCATGGCTTTTCGCCATCAATGGTGAGGCCTTATGAGATTAAAAGCAATGCAAGATTTGATCTAGGGTATGTTGGAATGCCTATGTTCATGGAGAATGATGAGGCAGAACTGCAATGGCCTGGTAGTTTCCGTCAGGTTGGAGAGGTAAGTGATAATGATAACACTCATCATCATCGTCATCATCACCACCACCAGAAGTTCGTGGTCACTGGAAGTTCAAATTTGAGTTTTGCAGAAGTGAATCCAGAAGTACACCTTGAGCTGGAGGACTCAACACCAGATTTAACATTGAAACTTTGA 822 0.444 MRPNLDLEVEASAENESEISSQVASDIFIHEISADPSSDSLNNASDNTNTIGFQLNNADPLSFDLTLSFNNNELGRVGESIGLSFSSTSESSNEPASQTTSATIQRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGFFSDRYASLASLPLHGSFRSLGVKTHSSLHHGFSPSMVRPYEIKSNARFDLGYVGMPMFMENDEAELQWPGSFRQVGEVSDNDNTHHHRHHHHHQKFVVTGSSNLSFAEVNPEVHLELEDSTPDLTLKL 273
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1339 273 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 23 233 IPR044246 GO:0009788
Lele26g1339 273 SUPERFAMILY beta-beta-alpha zinc fingers 105 135 IPR036236 -
Lele26g1339 273 Gene3D Classic Zinc Finger 85 151 - -
Lele26g1339 273 ProSiteProfiles Zinc finger C2H2 type domain profile. 108 135 IPR013087 -
Lele26g1339 273 FunFam Zinc finger protein 2 85 154 - -
Lele26g1339 273 ProSitePatterns Zinc finger C2H2 type domain signature. 110 130 IPR013087 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele26g1339 Lele-ChrLele26 9056498 9057319 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1339 90 273 C2H2 Transcription Factor Family AT1G66140 46.977 3.38e-46 154
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1328 25 9083100 9083915 Lele26g1339 26 9056498 9057319 CCT
Lele25g1315 25 8973583 8975394 Lele26g1339 26 9056498 9057319 CCT
Lele26g1339 26 9056498 9057319 Lele26g1339 26 9056498 9057319 ECH
Lele26g1339 26 9056498 9057319 Lele27g0758 27 15694670 15696170 hybridization