Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele26g1339 | ATGAGACCTAACTTGGATCTTGAAGTGGAGGCTTCTGCGGAAAATGAATCTGAAATTAGCAGCCAGGTTGCATCCGACATATTCATTCATGAAATATCTGCAGATCCTTCTAGTGACAGCCTCAACAATGCATCAGACAACACAAACACCATAGGATTTCAACTAAATAATGCAGATCCTCTTTCATTTGACTTAACTCTCAGCTTCAATAACAACGAGCTAGGCCGCGTCGGAGAATCCATAGGACTCTCATTCTCAAGCACCAGTGAGAGTAGCAACGAACCTGCCTCTCAAACTACTTCAGCCACCATCCAAAGAGTCTTCTCTTGCAACTACTGTCAGCGCAAGTTCTTCAGCTCGCAGGCTCTCGGTGGCCACCAGAATGCACACAAGAGGGAAAGAACACTAGCAAAGAGAGCTATGAGAATGGGGTTTTTCTCTGATAGGTATGCAAGTTTAGCATCCCTCCCTCTTCATGGCTCCTTCAGGTCCTTAGGAGTAAAAACACACTCCTCACTTCACCATGGCTTTTCGCCATCAATGGTGAGGCCTTATGAGATTAAAAGCAATGCAAGATTTGATCTAGGGTATGTTGGAATGCCTATGTTCATGGAGAATGATGAGGCAGAACTGCAATGGCCTGGTAGTTTCCGTCAGGTTGGAGAGGTAAGTGATAATGATAACACTCATCATCATCGTCATCATCACCACCACCAGAAGTTCGTGGTCACTGGAAGTTCAAATTTGAGTTTTGCAGAAGTGAATCCAGAAGTACACCTTGAGCTGGAGGACTCAACACCAGATTTAACATTGAAACTTTGA | 822 | 0.444 | MRPNLDLEVEASAENESEISSQVASDIFIHEISADPSSDSLNNASDNTNTIGFQLNNADPLSFDLTLSFNNNELGRVGESIGLSFSSTSESSNEPASQTTSATIQRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGFFSDRYASLASLPLHGSFRSLGVKTHSSLHHGFSPSMVRPYEIKSNARFDLGYVGMPMFMENDEAELQWPGSFRQVGEVSDNDNTHHHRHHHHHQKFVVTGSSNLSFAEVNPEVHLELEDSTPDLTLKL | 273 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele26g1339 | 273 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 23 | 233 | IPR044246 | GO:0009788 | |
Lele26g1339 | 273 | SUPERFAMILY | beta-beta-alpha zinc fingers | 105 | 135 | IPR036236 | - | |
Lele26g1339 | 273 | Gene3D | Classic Zinc Finger | 85 | 151 | - | - | |
Lele26g1339 | 273 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 108 | 135 | IPR013087 | - | |
Lele26g1339 | 273 | FunFam | Zinc finger protein 2 | 85 | 154 | - | - | |
Lele26g1339 | 273 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 110 | 130 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele26g1339 | Lele-ChrLele26 | 9056498 | 9057319 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele26g1339 | 90 | 273 | C2H2 Transcription Factor Family | AT1G66140 | 46.977 | 3.38e-46 | 154 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele25g1328 | 25 | 9083100 | 9083915 | Lele26g1339 | 26 | 9056498 | 9057319 | CCT | |
Lele25g1315 | 25 | 8973583 | 8975394 | Lele26g1339 | 26 | 9056498 | 9057319 | CCT | |
Lele26g1339 | 26 | 9056498 | 9057319 | Lele26g1339 | 26 | 9056498 | 9057319 | ECH | |
Lele26g1339 | 26 | 9056498 | 9057319 | Lele27g0758 | 27 | 15694670 | 15696170 | hybridization |