Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1337 ATGCCAACCCGAGGTTTCGGATATGCGGGCCCCACCTCCATGTGCGTTTCTGTTCCTTCTTCCCCTTTCTCGCGTTCTCATCCCTCTCTGCTCTGAACGAACATGAGGCAAAAATCCCACTTAAAGTTCAAGCCTTTACTCATCTTCCTTTCTGGGTTATTCTCAGTCTTCGTCTTCGTTGAGTCTCAAGCAAACCCTAGCCAAGATGCTCCTGCAATGGAAGCTCTCAAGAAGAGCCTCAACGTCCCTGAAATTGGATGGTCCGATTCGGACCCCTGCAAGTGGGACCATGTTGGCTGCGAGGAAGGTCGGGTCACGCGGATCCAAATCGGACGTCTAGGTCTTCAAGGTACGCTTCCTCCGACTCTTGGAGATCTCACTGAGTTACAGCGCTTGGAGCTTCAGTATAATAACATTTCGGGTCCTCTTCCTAGCTTAAAGGGGTTGGGTTCTTTGCAAGTGCTTCTTGTTAGTAACAACCAATTTAGTTCGATCCCTAGAGATTTTTTCACTGGCATGTCTCAACTTCAATCCGTGGAGATCGATAACAACCCATTTGAGGAATGGGAGATACCTGAAAGTCTTCGAGACGCTTCGTCTCTTCAGAACTTCTCTGCCAACTCGGCTAATATCACAGGCAAAATACCAGATTTTCTTAATGCAGGTGTGTTTCCTGGTTTGACCCTTTTGCATTTGTCCTTCAATAACCTCAAGGGTGGGTTTCCGGCGAGCTTTTCTGGTTTGCCGATTGAGACTTTGTGGGTTAATGGGCAGACAGGTAAACTTAATGGAACCATAGATTTTATGCAGAATATGACTTCCTTGAAGGAGGTTTGGTTGCATTCAAATGCATTATCGGGTCCATTACCAGATTTTTCAGGCTTGAAGAATTTGGAGACCTTGAGTTTAAGGGATAATTCGTTTACCGGTCCGGTTCCGTTGTCATTGATGAGTCTTAAATCATTGGAAGTTGTAAATTTGACTAATAACTTACTTCAGGGGCCTGTGCCAGTGTTCAATCCAGGGGTTCAAGTGGATATGACTAAGGATTCAAATGACTTTTGCTTGCCAAGTTCTGGGGATTGCGATCCTCAGGTGAATATTCTGCTTTCCATTGTTAAATTTATGGGATATCCTCAAAGGTTTGCTAAGGAATGGAAGGGAAATGATCCATGTAATGATTGGCTTGGGATTACTTGTAGTAATGGGAACATTACTGTTGTTAATTTTCAGAGGATGGGTCTATCTGGTACCATATCCCCTGAGTTTGCTTCTCTCAAATCGCTGCAAAGAATTATGCTTGCCGATAACGCTCTCACCAGCACGATTCCGGGAGAGCTCAGTACACTTCCTAGGCTTACTGAACTGAATCTTGCGAACAATCAGCTTTATGGGAAAGTCCCATCTTTTAGGAGTAATGTAATCGTTAACACGAATGGTAACAAGTACATAGGCAACGATAGAAGCAGTTCAAACCCTCCAGGTTCAGCATCTCCGAACCCTACAAGTCAAGGTACATCAGGAGAAAATGGTGGGATTTCTGCGAATGGTGGCAAAAAATCTTCTCATGTGGCAGTGATCGTAATCGCTGCAGTTGGCGGTGTGTTTTTGGTTTCGATGATTGGTGTCATAGTTTTCTGCTTGTATAGAATGAAGCAAAAGCAGTTAAGCAGGGTACAGAGCCCGAATGCGCTGGTAATTCACCCTCGTCATTCTGGATCAGATAACGAAAGTTTGAAAATTACAGTTGCTGGCTCGAGTGTCAGTGTTGGCACAGCTAGTGAAACTCAAACAGTACCTGGCAGTGAGGCGGGAGGAGATATCCAAATGGTTGAAGCGGGAAACATGGTCATTTCCATACAAGTCCTTCGGAATGTGACCGACAATTTCAGTGAAAAGAATATCTTGGGACGAGGCGGTTTTGGAACAGTATACAAAGGCGAACTTCACGATGGTACCAAAATTGCGGTGAAAAGAATGGAGTCTGGAGCAATAACTGGAAAGGGCGCATCAGAATTCAAATCCGAAATCGCTGTTTTGACAAAAGTTCGCCACCGGCATCTCGTTGCACTTCTCGGCTTCTGCTTGGATGGGAATGAAAAGCTTTTGGTGTATGAATACATGCCTCAGGGTACACTAAGTAGGCATCTGTTTAACTGGCCAGAAGAAGGATTGCAACCCTTGGACTGGAATAGGAGGTTGACCGTTGCCTTAGATGTCGCTAGGGGTGTCGAGTACCTTCATGGCTTAGCCCATCTAAGCTTTATACATAGAGACTTAAAGCCCTCAAACATTCTTCTTGGAGATGATATGAGAGCGAAGGTCGCAGATTTTGGTCTTGTCCGTCTTGCTCCAGAAGGAAAAGGCTCAATAGAAACACGGATTGCTGGAACGTTCGGATACCTGGCACCAGAATATGCAGTTACTGGCCGTGTGACGACTAAAGTAGATGTATACAGTTTTGGGGTGATACTGATGGAAATCATAACTGGAAGGAAAGCGCTTGATGAAACCCAACCCGAGGACAGCATGCACCTTGTAACATGGTTCCGCAGAATGTACATAAACGAAGAATCGTTTAGCAAGGCTATTGACCCCTCGATTGATCGCAATGAGGAAACTCTTGCCAGCATTCGCACGGTGGCGGAGCTAGCAGGCCACTGCTGTGCACGAGAGCCGTATCAAAGACCGGACATGGGCCATGCCGTAAATGTTCTTTCCTCGTTGGCAGAACTCTGGAAGCCATCTGATCAGAGTTGTGAAGATATATATGGCATTGATCTTGACATGTCTTTGCCTCAAGCGCTTAAGAAATGGCAGGCTTATGAAGGTAGAGGAGGAGGTTCAATTGACTCGTCTTCTTCTTCGCTCCTTCCGAGCTTGGACAACACGCAGACGAGCATACCGACACGTCCACATGGTTTTGCCGAGTCTTTCACATCAGCAGATGGGAGGTGA 2958 0.4577 MPTRGFGYAGPTSMCVSVPSSPFSRSHPSLLXTNMRQKSHLKFKPLLIFLSGLFSVFVFVESQANPSQDAPAMEALKKSLNVPEIGWSDSDPCKWDHVGCEEGRVTRIQIGRLGLQGTLPPTLGDLTELQRLELQYNNISGPLPSLKGLGSLQVLLVSNNQFSSIPRDFFTGMSQLQSVEIDNNPFEEWEIPESLRDASSLQNFSANSANITGKIPDFLNAGVFPGLTLLHLSFNNLKGGFPASFSGLPIETLWVNGQTGKLNGTIDFMQNMTSLKEVWLHSNALSGPLPDFSGLKNLETLSLRDNSFTGPVPLSLMSLKSLEVVNLTNNLLQGPVPVFNPGVQVDMTKDSNDFCLPSSGDCDPQVNILLSIVKFMGYPQRFAKEWKGNDPCNDWLGITCSNGNITVVNFQRMGLSGTISPEFASLKSLQRIMLADNALTSTIPGELSTLPRLTELNLANNQLYGKVPSFRSNVIVNTNGNKYIGNDRSSSNPPGSASPNPTSQGTSGENGGISANGGKKSSHVAVIVIAAVGGVFLVSMIGVIVFCLYRMKQKQLSRVQSPNALVIHPRHSGSDNESLKITVAGSSVSVGTASETQTVPGSEAGGDIQMVEAGNMVISIQVLRNVTDNFSEKNILGRGGFGTVYKGELHDGTKIAVKRMESGAITGKGASEFKSEIAVLTKVRHRHLVALLGFCLDGNEKLLVYEYMPQGTLSRHLFNWPEEGLQPLDWNRRLTVALDVARGVEYLHGLAHLSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMEIITGRKALDETQPEDSMHLVTWFRRMYINEESFSKAIDPSIDRNEETLASIRTVAELAGHCCAREPYQRPDMGHAVNVLSSLAELWKPSDQSCEDIYGIDLDMSLPQALKKWQAYEGRGGGSIDSSSSSLLPSLDNTQTSIPTRPHGFAESFTSADGR 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1337 985 SUPERFAMILY Protein kinase-like (PK-like) 610 914 IPR011009 -
Lele26g1337 985 MobiDBLite consensus disorder prediction 950 985 - -
Lele26g1337 985 Gene3D Transferase(Phosphotransferase) domain 1 708 925 - -
Lele26g1337 985 Pfam Leucine rich repeat 423 463 IPR001611 GO:0005515
Lele26g1337 985 SMART serkin_6 630 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1337 985 Gene3D Ribonuclease Inhibitor 364 488 IPR032675 -
Lele26g1337 985 SUPERFAMILY L domain-like 99 470 - -
Lele26g1337 985 MobiDBLite consensus disorder prediction 950 974 - -
Lele26g1337 985 FunFam Leucine-rich repeat receptor-like kinase 364 487 - -
Lele26g1337 985 CDD STKc_IRAK 636 909 - -
Lele26g1337 985 MobiDBLite consensus disorder prediction 481 516 - -
Lele26g1337 985 FunFam receptor protein kinase TMK1 708 925 - -
Lele26g1337 985 Gene3D Ribonuclease Inhibitor 67 362 IPR032675 -
Lele26g1337 985 Gene3D Phosphorylase Kinase; domain 1 591 707 - -
Lele26g1337 985 ProSitePatterns Serine/Threonine protein kinases active-site signature. 755 767 IPR008271 GO:0004672|GO:0006468
Lele26g1337 985 FunFam Receptor-like kinase TMK4 67 360 - -
Lele26g1337 985 Pfam Protein kinase domain 631 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1337 985 FunFam receptor protein kinase TMK1 591 707 - -
Lele26g1337 985 SMART LRR_typ_2 149 172 IPR003591 -
Lele26g1337 985 SMART LRR_typ_2 272 294 IPR003591 -
Lele26g1337 985 SMART LRR_typ_2 426 450 IPR003591 -
Lele26g1337 985 SMART LRR_typ_2 224 247 IPR003591 -
Lele26g1337 985 SMART LRR_typ_2 126 148 IPR003591 -
Lele26g1337 985 ProSiteProfiles Protein kinase domain profile. 630 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1337 985 Pfam Leucine rich repeat N-terminal domain 67 100 IPR013210 -
Lele26g1337 985 Pfam Leucine rich repeat N-terminal domain 363 401 IPR013210 -
Lele26g1337 985 ProSitePatterns Protein kinases ATP-binding region signature. 636 658 IPR017441 GO:0005524
Lele26g1337 985 PANTHER OSJNBA0070M12.3 PROTEIN 53 985 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1337 Lele-ChrLele26 9026296 9029639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1337 117 912 Receptor kinase-like Gene Family AT5G07280 31.785 2.35e-87 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lele26g1337 Pkinase 1.5e-45 CL0016