Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1330 ATGGATGCTCAATCCCGGAAAATGGCAATATTTCGTGCTAAATTGAATGCTCAGAAGAAGGAAAAACGCATAGAATCCGCTCTTGTGAGGTATAATGAATTTGATCAACCAGTCTGCCGGGTTTGTGACGTTGCGCTGAAGCATGAATCAAATTGGGATGCACACCAAATTTCTCGTAAGCATCGGGAGGCAATAAGTAATCTTAAAGCTACTGGATTGGCCCAGCAAAGTCATGCAAAGCCTGTTACAGATACCAAGTTGCCTAAGCCTAAACCTGAGCATGCTTCAGAATCACAATCTAAAATACCCAGTCATTCACAAGAATCGCTGAAACCTCCATCATCATCATCTGTGCTTCCACCAGATTTTTTTGATAACAATGATGCTAGAAAGCCAAGATCGGAAAAAGACTCTGTCCAGTTGGTGGACCCTGATTCAAATAAAAGGACAGGGATTTCTGCTCAGAATCAAGCATTAAACTCAGAGAAGGTAAAAGGTGCTTTACATGACAATAATGCAGCACAGCCAAAGGGAAGTCAGGAAGCAATGGAGACTAGGCAGCCATCAAGCATGCCTGCTGATACAGAAGCCAAACAAATAAAAGGGGTTCTTCCTGAAGGCTTTTTTGATAACAAGGAGGCTGATTTGCGTGCTCGTGGCATAAAACCTGTTAAGCCTGATGTCAAGGACGAGTACAAGGAATTTGAAAAGTTGATTCAAGACGACTTGCAGGAGGTGGATGACCGGTTTGAAGAAGAAGAGATTGATGCTGCTGAAATGATTGAAGAAGCTGAAACTGTGGAGCAGAGGAACAACAGAGAGAGAGTGGAGAACTTGAGGAAGAGGAGATTGGAGTTGAAGGCTGCTAAAGATGAAAAGCGCAGTAAAACTTCTGAGGCGGTAATGGAGTCTAGACACGACGATCCATTAACTGATGATGACAGTGACGATAATTTTGCTGTGGATTGGAGAGCACAACACCTGTGA 987 0.4326 MDAQSRKMAIFRAKLNAQKKEKRIESALVRYNEFDQPVCRVCDVALKHESNWDAHQISRKHREAISNLKATGLAQQSHAKPVTDTKLPKPKPEHASESQSKIPSHSQESLKPPSSSSVLPPDFFDNNDARKPRSEKDSVQLVDPDSNKRTGISAQNQALNSEKVKGALHDNNAAQPKGSQEAMETRQPSSMPADTEAKQIKGVLPEGFFDNKEADLRARGIKPVKPDVKDEYKEFEKLIQDDLQEVDDRFEEEEIDAAEMIEEAETVEQRNNRERVENLRKRRLELKAAKDEKRSKTSEAVMESRHDDPLTDDDSDDNFAVDWRAQHL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1330 328 MobiDBLite consensus disorder prediction 170 197 - -
Lele26g1330 328 MobiDBLite consensus disorder prediction 126 143 - -
Lele26g1330 328 Coils Coil 243 296 - -
Lele26g1330 328 MobiDBLite consensus disorder prediction 173 194 - -
Lele26g1330 328 MobiDBLite consensus disorder prediction 84 98 - -
Lele26g1330 328 MobiDBLite consensus disorder prediction 71 157 - -
Lele26g1330 328 MobiDBLite consensus disorder prediction 286 328 - -
Lele26g1330 328 PANTHER UNCHARACTERIZED 1 328 IPR040050 GO:0003676|GO:0005681|GO:0008270
Lele26g1330 328 SUPERFAMILY beta-beta-alpha zinc fingers 31 71 IPR036236 -
Lele26g1330 328 Pfam Zinc-finger of C2H2 type 39 61 - -
Lele26g1330 328 MobiDBLite consensus disorder prediction 99 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1330 Lele-ChrLele26 8976417 8979869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1330 1 328 C2H2 Transcription Factor Family AT3G02860 48.961 2.08e-83 253