Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1315 ATGCGCTATGTCTCACTACTGATATTTCTCTTCCTCTCCACCGCCGTCTCTAGCATTTGTTCCCACTCTCACTCATCCTCCATAGACTCCTTCATCTTCGCCGGCTGCACCCAACAGAAGTACTCGCCGGACTCACCTTATGCCTCCAACCTCCAAGCCTTACTCACTTCCCTCCTCAGCTCCGCCACCTACTCTTCTTACTCCAACTTCTCCGTCCTCGGCTCCTCCGTCGTCTACGGCCTCTACCAATGCCGTGGCGACCTCTCCATGCCCGACTGCTCCTCCTGCATCTCCCGCTCCCTCAACCGCCTCTCCGCCCTCTGCCCCTCCACGTGCGGAGCTTCCATCCAGCTTGACGGTTGCTTCGTCAAGTATGATAACGCCACCTTCGTCGGTGTCGAGGACAAGACCGTCGTTTTCAAGAAATGTGGACCTTCCGTGGGAAGTAGTAGCAGCGGCAACGATATGGGGAGCACTGAGGCGGTTTTGTCTGCGTTGTCGGGTTCCGGTGGATATTTCAGGGTGGTCGGGTCGGGTAATGTGCAGGGTGTGGCTCAGTGCACCGGCGATCTTGCTTTCGGTCAGTGCCAGGACTGTCTCTCGGAGGCAATCCGCGGGCTCAGAAGCGAATGTGGAAGTGCCGATTACGGGGACGTATTCTTGGGCAAGTGTTATGCTAGATATTCAGTTGGTGGGGCCCACGCTTATGAACCGAAGGCCCACGGGAAATCAAAGAATGGAGGAGAACAGACATTTGTGATAATAATTGGATTATTAGCGGGAATAGCTGTCCTCGTAATTTTCCTTGCTTTCTTAAAGAGCATTTGTGCTCGAGGACATGGTAATTTCACCCAACATATTTAA 864 0.537 MRYVSLLIFLFLSTAVSSICSHSHSSSIDSFIFAGCTQQKYSPDSPYASNLQALLTSLLSSATYSSYSNFSVLGSSVVYGLYQCRGDLSMPDCSSCISRSLNRLSALCPSTCGASIQLDGCFVKYDNATFVGVEDKTVVFKKCGPSVGSSSSGNDMGSTEAVLSALSGSGGYFRVVGSGNVQGVAQCTGDLAFGQCQDCLSEAIRGLRSECGSADYGDVFLGKCYARYSVGGAHAYEPKAHGKSKNGGEQTFVIIIGLLAGIAVLVIFLAFLKSICARGHGNFTQHI 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1315 287 ProSiteProfiles Gnk2-homologous domain profile. 29 130 IPR002902 -
Lele26g1315 287 ProSiteProfiles Gnk2-homologous domain profile. 134 233 IPR002902 -
Lele26g1315 287 FunFam cysteine-rich repeat secretory protein 3 28 130 - -
Lele26g1315 287 Gene3D - 148 231 IPR038408 -
Lele26g1315 287 Gene3D - 28 130 IPR038408 -
Lele26g1315 287 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 4 276 - -
Lele26g1315 287 Pfam Salt stress response/antifungal 36 127 IPR002902 -
Lele26g1315 287 Pfam Salt stress response/antifungal 173 229 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1315 Lele-ChrLele26 8864253 8865491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1315 38 270 Receptor kinase-like Gene Family AT5G40380 28.511 4.08e-17 79.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1311 25 8909451 8910838 Lele26g1315 26 8864253 8865491 CCT
Lele25g1300 25 8797088 8797772 Lele26g1315 26 8864253 8865491 CCT
Lele26g1315 26 8864253 8865491 Lele28g1308 28 8838040 8838624 hybridization