Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1310 ATGGGAAGGCAACCTTGCTGTGACAAAGTTGGATTGAAGAAAGGCCCTTGGACTGCTGATGAAGACAAGAAACTCATCAACTTCATCCTCACCAATGGCCAATGTTGCTGGAGAACTGTCCCTAAGCTTTCAGGGCTATTGAGATGTGGGAAAAGTTGCAGGCTGAGATGGACCAACTACCTCAGACCAGATTTGAAGAGAGGTCTCCTTTCTGAATATGAAGAGAAAATGGTGATTGATCTCCATGCCCAACTTGGCAACAGATGGTCTAAGATTGCGTCTCATCTTCCTGGAAGAACTGATAATGAGATCAAGAACCATTGGAACACACACATCAAGAAGAAGCTTAAGAAAATGGGGATTGATCCTGTCACTCACAAGCCTCTCTCTGATCAACAACAACAAACCCAGAATCCGACACCATCACAGGCACAGATTAATCAACTTCAGATACAACAGCAACCTGTGATAACTAGCCTCAAGATTGATCAAAATAATGGAGAACCAGAGACAGAGAAGGCAGACACCTTGTATGAGTCATCATCAACCTTAACTGAATCGAAAGAGGAGGATCATCACAAGATTGATGAAGAAACTCCCTCATTTGAAGACATCACCAACAGTTTCTGCACTGACGAGGTTCCATTGATTGAGCCTGATGAGATTCTAATGCCTTCCTCTGGTCCGACCCCTTCGTCTTCTTCATCTTCTTCTTCTACTTCAAATTCTTCCAACATCCTCGGAGACCTGGAGCTGCCGGAATTCGAGTGGGCTTGTAATTACAGAGACAATAACGACAGCAGCAACAACAATAATAATAACAGTATGGGGTTGTGGGATGGTGATGATTTTATGAGCGGTTGGGATTTGCTTTTGAATGATGATGACGATGTAGACAAGAAGATGGCATATTTTGATTCTGCTCTGAAACAATGTCCAAGAATGGTCATGGATCAAAAATCTTGGGCATATGGGTTGTTTTGA 984 0.4299 MGRQPCCDKVGLKKGPWTADEDKKLINFILTNGQCCWRTVPKLSGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPVTHKPLSDQQQQTQNPTPSQAQINQLQIQQQPVITSLKIDQNNGEPETEKADTLYESSSTLTESKEEDHHKIDEETPSFEDITNSFCTDEVPLIEPDEILMPSSGPTPSSSSSSSSTSNSSNILGDLELPEFEWACNYRDNNDSSNNNNNNSMGLWDGDDFMSGWDLLLNDDDDVDKKMAYFDSALKQCPRMVMDQKSWAYGLF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1310 327 SMART sant 66 114 IPR001005 -
Lele26g1310 327 SMART sant 13 63 IPR001005 -
Lele26g1310 327 MobiDBLite consensus disorder prediction 123 148 - -
Lele26g1310 327 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele26g1310 327 MobiDBLite consensus disorder prediction 184 200 - -
Lele26g1310 327 MobiDBLite consensus disorder prediction 221 245 - -
Lele26g1310 327 PANTHER F14D16.11-RELATED 1 271 - -
Lele26g1310 327 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele26g1310 327 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele26g1310 327 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Lele26g1310 327 FunFam MYB transcription factor 11 67 - -
Lele26g1310 327 Gene3D - 70 146 - -
Lele26g1310 327 MobiDBLite consensus disorder prediction 162 200 - -
Lele26g1310 327 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele26g1310 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele26g1310 327 MobiDBLite consensus disorder prediction 127 148 - -
Lele26g1310 327 CDD SANT 74 112 IPR001005 -
Lele26g1310 327 Gene3D - 11 67 - -
Lele26g1310 327 FunFam MYB-related transcription factor 70 130 - -
Lele26g1310 327 CDD SANT 16 61 IPR001005 -
Lele26g1310 327 MobiDBLite consensus disorder prediction 226 245 - -
Lele26g1310 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1310 Lele-ChrLele26 8803896 8805192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1310 1 295 MYB Transcription Factor Family AT1G66230 59.016 7.65e-103 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele26g1310 Myb_DNA-binding 1.7e-11 CL0123