Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1296 ATGTCCTCCGCCAGAATTCAACCCACGGCATGTGCTCTCTCATCCACCATCAAACAATGCCTCCGCCTCAGCTTCCACCCTTCCATTTCTTCCCTTTGTTTCAACCATTGCGCAATTCGTGGCCAGGGCACTCTCTGGAGGACCCTTAGGGTTTCTATGTCTTCTTCTCCTTCTTCGTCCAGCCCTCTTCAGATTTGCGTCAAAGATTCTGTTACCACTCCCGGCAAGCTTGGCGACTGCCCCTTTTGCCAAAGAATATTGCTGACATTGGAGGAAAAGGATCTACCTTATGAGATGAAGTTGGTGGATCTGAAACACAAGCCTGAATGGTTCTTAAAAATCAACCCAGACGGTAAAGTTCCTGCGATAAACCTCAATGAGAAGTGGGTTGCTGATTCAGATGTTATTGCACAAGCATTGGAAGAGAAGTTTCCTAGCCCACCATTGGGAACCCCACCTGAAAAGGCATCAGTTGGCTCAAAGATCTTTTCGACATTCATTGGGTTTCTCAAGAGCAAAGATCCAAATGATGGGACAGAGCAAGCCTTATTAAGTGAACTAGGTTCTTTGAATGATTACCTCAAGGAAAATGGTCCTTTTATCAATGGGAAAGACATATCTGCAGTAGACTTATCCCTTGGACCAAAGCTATACCACGTGGAGATTGCTTTGGGACATTTTAAGAAATGGACGGTTCCTGATTCCCTCCCCTCTGTGAAGTCTTATATGAAGGCTATTTTCTCAAGGGATTCATTTATCAAAACACGTGCACAACAGCAGGATGTCATTGAAGGCTGGCGTCCGAAAGTCGACGGCTGA 819 0.4567 MSSARIQPTACALSSTIKQCLRLSFHPSISSLCFNHCAIRGQGTLWRTLRVSMSSSPSSSSPLQICVKDSVTTPGKLGDCPFCQRILLTLEEKDLPYEMKLVDLKHKPEWFLKINPDGKVPAINLNEKWVADSDVIAQALEEKFPSPPLGTPPEKASVGSKIFSTFIGFLKSKDPNDGTEQALLSELGSLNDYLKENGPFINGKDISAVDLSLGPKLYHVEIALGHFKKWTVPDSLPSVKSYMKAIFSRDSFIKTRAQQQDVIEGWRPKVDG 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1296 272 FunFam Glutathione S-transferase DHAR3, chloroplastic 150 272 - -
Lele26g1296 272 FunFam Glutathione S-transferase DHAR3 chloroplastic 61 149 - -
Lele26g1296 272 SFLD Main (cytGST) 79 247 - -
Lele26g1296 272 Pfam Glutathione S-transferase, N-terminal domain 79 148 IPR004045 -
Lele26g1296 272 SUPERFAMILY Thioredoxin-like 79 146 IPR036249 -
Lele26g1296 272 Gene3D - 150 272 - -
Lele26g1296 272 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 62 269 IPR044627 GO:0033355|GO:0045174|GO:0098869
Lele26g1296 272 Gene3D Glutaredoxin 62 149 - -
Lele26g1296 272 SUPERFAMILY GST C-terminal domain-like 143 269 IPR036282 -
Lele26g1296 272 SFLD Glutathione Transferase (cytosolic) 79 247 IPR040079 -
Lele26g1296 272 CDD GST_N_family 80 141 - -
Lele26g1296 272 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 70 148 IPR004045 -
Lele26g1296 272 CDD GST_C_DHAR 149 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1296 Lele-ChrLele26 8608679 8613008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1296 1 272 Glutathione S-transferase Gene Family AT5G16710 62.044 5.38e-123 349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1296 26 8608679 8613008 Lele25g1286 25 8689563 8691365 CCT
Lele26g1296 26 8608679 8613008 Lele26g1295 26 8586761 8588554 CCT
Lele26g1296 26 8608679 8613008 Lele27g0800 27 16078070 16079872 CCT
Lele26g1296 26 8608679 8613008 Lele28g1286 28 8625373 8627151 CCT
Lele26g1296 26 8608679 8613008 Lele26g1296 26 8608679 8613008 ECH
Lele26g1296 26 8608679 8613008 Lele27g0799 27 16054234 16058880 hybridization
Lele26g1296 26 8608679 8613008 Lele28g1287 28 8647154 8655466 hybridization