Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1288 ATGGAAAAGAACACGGGTAGTGGGTTGAGGAAAGGTAGCTGGACCCAAGAGGAAGACAATCTTCTCAGAGCTTGCATTCCCCAGTACGGTGAAGGAAAATGGCATCTTGTTCCTCAAAGAGCTGCTGGAAGGCTACCAGGAAGAACAGCGAATGACGTGAAGAACTTCTGGCACACCAACATGCGCAATAAGACAGAAGAAAATCAGAGGAAGAAGAAAGCAAAAGATCAGGTGATGAATAATAATATAGAGGAGACGACGGCAGAAGTAGTAGTAAAACGGCCCGTAGTGATAAAACCTCAGCCTCACACTTTCTCTAAGAATTCGCCATGGCTGAGGAGGAATAAGCTTGTTTCTGCAAGCGACGCTGGTGATGAAACTAATAATAATATGAATGCATCAGCGGCTAAAACTAGTTCTGCAGAGCCATGTGGTGGTGGTGATTTTATACAGAGAGATCATCATCATCAGTCAAAAGAGTGGTGGGAGAGTTTACTGAACAAGGAAGTAGATGAAAGGCAAGTTGGGAATTTCACGAGGATGGAGTTTTGGGACGACGAAGAAGACTTTCTGAAAATGAAAGGTCCATTTTTGGAAGGCCAGAGTTCTTGGAGAACTGCGGAAAGTGGAGCAAGCTACAAAATTAGCATGCATGGATCGATGTTGTAG 669 0.4425 MEKNTGSGLRKGSWTQEEDNLLRACIPQYGEGKWHLVPQRAAGRLPGRTANDVKNFWHTNMRNKTEENQRKKKAKDQVMNNNIEETTAEVVVKRPVVIKPQPHTFSKNSPWLRRNKLVSASDAGDETNNNMNASAAKTSSAEPCGGGDFIQRDHHHQSKEWWESLLNKEVDERQVGNFTRMEFWDDEEDFLKMKGPFLEGQSSWRTAESGASYKISMHGSML 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1288 222 SUPERFAMILY Homeodomain-like 7 64 IPR009057 -
Lele26g1288 222 Gene3D - 8 66 - -
Lele26g1288 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 65 IPR017930 -
Lele26g1288 222 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 7 41 - -
Lele26g1288 222 ProSiteProfiles Myb-like domain profile. 6 61 IPR001005 -
Lele26g1288 222 MobiDBLite consensus disorder prediction 121 148 - -
Lele26g1288 222 SMART sant 10 63 IPR001005 -
Lele26g1288 222 CDD SANT 13 61 IPR001005 -
Lele26g1288 222 Pfam Myb-like DNA-binding domain 11 59 IPR001005 -
Lele26g1288 222 Coils Coil 61 81 - -
Lele26g1288 222 MobiDBLite consensus disorder prediction 121 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1288 Lele-ChrLele26 8503430 8505053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1288 8 170 MYB Transcription Factor Family AT1G66370 32.394 1.09e-21 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele26g1288 Myb_DNA-binding 1.1e-11 CL0123