Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1283 ATGGGGTTTTCCCAAGAAACCTGCACTGATTCTTGGGAGTCTTCAAATCCACAAAATACTAATGATACAGCCGCAGATCACTACTACGACTATAACAAGCTCAAATTCAGAAGCACTTGGAGAAAAATGGTATGGATGATTGGGTTTGCCTGCATTACCCTCCCTCGCCGGCGGCGGCGGAACGCGGGGGTGATTCAGGGTCAAGAAAAAAACAAGGCGTGGCTACTGGCGGAGTCCGGCGGGTGTCTGGCGGAGTCGACGAATGCCGACCCACAATCTGTTCACTCATCTTTCAGATTCAATGTATGTTCTCAGGTTGAGCTGGAATCTCTGGAAATGAGTTCTTCCGCTGCTGCGATGGTCTTGATGGTGAATTTGGATAATGGGGTGAGTGATGTTAGTGAATCTCGAGCTCGGAAGCTAAAATGGTGGAGAATAGATTCATTGAACAAAATCATATTTCCAGTAAACAATACTCTGATCAGATTCAACTACAGTGAAATCCTCTCTACTACCCAGAATTTCTCCAAAGGAAGAGTATTGGGAAGAGGGGCTTTGAGCTGTGTTTTCAGAGGCAAAATTGGAATTCTGAGAAATGCTGTGGCAATTAAGAGATTGGACAAAGAAGACAAGGAATGCTCAAAATCATTCTGTAGAGAATTGATGATTGCTAGCTCTCTTCACAACCCAAACGTTGTTCCTCTTGTAGGGTTTTGGAAGAAGAAGGGTGTAAAGGGAAATTCACCACTACCTTGGTCTGTGAGGTATAAAGTTGCAGTTGGGATAGCAGAAGCAATTTCTTATCTGCATAATGGAACCAAAAGATGTGTTGTTCATAGAGACATTAAGCCTTCTAACATTCTTCTTTCCTCTAGAAAATCTCCCAAGGCTAAACCATTGCTTCATCAGAAAGGGAAAGAAGCCATTGAGCTACTTGATCCTCAACTCAATTGCACCTTAAAATCCTCGAAACAGATATCTCGAATGATCGAAGCTGCAGCAGCCTGTGTCACAAACGAAGAATCTCGGAGACCCGGCATTAACGAGATCATCGCGATGCTGAAGGGTCAAGAACCAATCTTATCTAAAAGAAGGAAGCATTCTTTTCATGCTAATGGATCCGTAATTGATTCTTATCCTCAGTTACAAGAAACAAACACAGAGATCAAAGGTCACTTGGCTTTGGCAATGTTAGGTGTTTCAGAGTTGGAGGATGATGATTACCTCTTTGGTCGTTAA 1239 0.431 MGFSQETCTDSWESSNPQNTNDTAADHYYDYNKLKFRSTWRKMVWMIGFACITLPRRRRRNAGVIQGQEKNKAWLLAESGGCLAESTNADPQSVHSSFRFNVCSQVELESLEMSSSAAAMVLMVNLDNGVSDVSESRARKLKWWRIDSLNKIIFPVNNTLIRFNYSEILSTTQNFSKGRVLGRGALSCVFRGKIGILRNAVAIKRLDKEDKECSKSFCRELMIASSLHNPNVVPLVGFWKKKGVKGNSPLPWSVRYKVAVGIAEAISYLHNGTKRCVVHRDIKPSNILLSSRKSPKAKPLLHQKGKEAIELLDPQLNCTLKSSKQISRMIEAAAACVTNEESRRPGINEIIAMLKGQEPILSKRRKHSFHANGSVIDSYPQLQETNTEIKGHLALAMLGVSELEDDDYLFGR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1283 412 SUPERFAMILY Protein kinase-like (PK-like) 156 296 IPR011009 -
Lele26g1283 412 Pfam Protein tyrosine and serine/threonine kinase 177 242 IPR001245 GO:0004672|GO:0006468
Lele26g1283 412 ProSiteProfiles Protein kinase domain profile. 175 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1283 412 Gene3D Phosphorylase Kinase; domain 1 160 242 - -
Lele26g1283 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Lele26g1283 412 PANTHER OS08G0249100 PROTEIN 247 292 - -
Lele26g1283 412 SMART serkin_6 175 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1283 412 Gene3D Transferase(Phosphotransferase) domain 1 243 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1283 Lele-ChrLele26 8478253 8480989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1283 162 325 Receptor kinase-like Gene Family AT5G10530 32.474 2.86e-22 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele26g1283 None None None