Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1277 ATGAGAAAGCCTTGCTGTGACAAAGAAGACACCAACAAAGGAGCTTGGTCCAAACAAGAAGACCAGAAGCTCATCGATTACATCCAAACTCATGGCGAAGGGTGCTGGCGTTCCCTTCCCAAAGCTGCAGGTTTCTTCTCAAAACTTTTGCTTTTCTTTCTTTTCACGATCCCAAGGTGGTCCCTGATAGCTGGAAGGTTACCTGGAAGAACAGACAATGAGATAAAGAACTATTGGAATTCTCACATCCGCAGGAAGCTGATGAAGATGGGGATAGATCCAGATAACCATAAGCTTATTCATCTTCATCACCAAAGCTTTCCGCTTGTTCATGCTGCTGCTGCAACTTCCTCTGACTCCTTCATCAAGGAGTCAGAGGAAGTTGATAATAATTCCAAAAACTTGAATCTTGACCTCGCTATTGCTTTTCCTTCTCTCACAGTACCAAACCCAAACTTATCAAGTGCTGAGTCATCCCACAATAATAATAATACTAAGGACATGGAACAAAGCCAATCAGCGCCAACCCTTCCTCTATTTAACTAG 546 0.4304 MRKPCCDKEDTNKGAWSKQEDQKLIDYIQTHGEGCWRSLPKAAGFFSKLLLFFLFTIPRWSLIAGRLPGRTDNEIKNYWNSHIRRKLMKMGIDPDNHKLIHLHHQSFPLVHAAAATSSDSFIKESEEVDNNSKNLNLDLAIAFPSLTVPNPNLSSAESSHNNNNTKDMEQSQSAPTLPLFN 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1277 181 MobiDBLite consensus disorder prediction 151 181 - -
Lele26g1277 181 SMART sant 12 85 IPR001005 -
Lele26g1277 181 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 45 - -
Lele26g1277 181 CDD SANT 15 83 IPR001005 -
Lele26g1277 181 Pfam Myb-like DNA-binding domain 59 82 IPR001005 -
Lele26g1277 181 Pfam Myb-like DNA-binding domain 13 42 IPR001005 -
Lele26g1277 181 Gene3D - 15 87 - -
Lele26g1277 181 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 87 IPR017930 -
Lele26g1277 181 ProSiteProfiles Myb-like domain profile. 8 83 IPR001005 -
Lele26g1277 181 SUPERFAMILY Homeodomain-like 13 84 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1277 Lele-ChrLele26 8420694 8422074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1277 2 101 MYB Transcription Factor Family AT4G09460 52.344 4.15e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele26g1277 Myb_DNA-binding 1.2e-06 CL0123