Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1271 ATGGGTTGCGGCTTTAGCGCGGGGAGCAAGTCTGAAAACCCTTCACTCAAGGCTGTGAATTTGATCCATGATGGCAAAGAAGAGGATGGTTTGATTGGTGGAAGCTACAAGGTCTCCCGATTAAAAAATTTCACATATAATGAGCTGAAAACAGCTACAAGGAACTTTCATCCAGACAATATGGTGGGCGAAGGTGGGTTTGGTCGGGTATTTAAGGGGTGGCTTGATGTGCAGACACTTGCACCTGCTAAACCAGGTACTGGGATTGCAATTGCTGTGAAGAAGCTTAACCAAGAGAGCTTCCAAGGGCACAAAGAATGGTTGACAGAGATCAACATTCTGGGACAGCTGCATCATCCTAATCTTGTGAAATTGATTGGTTACTGTTCAGAGGATGAGCAACGGCTTTTGGTATATGAGTTTTTGACCAGAGGCAGCTTGGATAATTATTTATTTCTAAGGACATCTCATGTTGAACCTCTTTCTTGGAGCAACCGTATGAAAATTGCCCTTAATGCTGCCAAGGTTCTTACATTTCTTCACAGTGATGAAGTAAATGTGATATATCGTGATTTAAAAGCTGCTGATATCTTGCTTGATTCAAACTTCAATGCAAAGCTATCCGATTTTGGTTTGGCCAGGGCCGGGCCATTGGGTGATGAGAGCCATGTCTCTACAAGGGTCATGGGAACATTTGGCTATGCTGCTCCTGAGTATATAGCCACAGGTCACCTGACAAAGAAGAGTGATGTATACACTTTCGGGGTCGTTCTGCTCGAAATTATGTCAGGCAAGCGCACACTGGACAGAAGCAGGACAGCCAGGGAACATAATTTAGTGGAATGGGCCAAGCCGTACCTTTCGAGTAAGCGCCAGATTTTCAAAGTTATGGATGCTCGTATCGAAGGCCAGTACCTGGTACGTGAAGCCATGGAAGTGGCAAAAATTGCGATCCAATGCCTGTCTGCAGATCCCCAGTTGAGACTGACCATGGCCGATGTGGTAAGGGCATTGAAACAGCTTCAGGATTCCAGAGATACAGCTGGTACTTCTGAGCCCATATCATCGCTTCTCATTAGAGCTTGTGCTGCTCTTCTGCTCTTACTCTTTGCCTTTGCTTCTCAATGCAATGCAGATCATCACTCAACGGCAACATTGGTTGTAAATTTTGAATCTGGATGGCGAATTTCTGAACACTTTTTTGGAGTATTTTTCGAGGAGATTAATCATGCTGGATCTGGAGGATTATGGTCAGAACTTATAAGGAATAGAGGTTTTGAAGCTGGAGGCACAACAGTTCCTTCGAGTATTTCTCCTTGGTCAATTGTTGGAAATGAATCAACTATTCGTGTAGAAACGAAAATTGCCTCTCCCTTTCCCCGTAATAAAGTTGCTGCGAGACTCGATATCCTTTGTGAATCTCCTAAGGATTGCCCGCATGGTGTTGGCCTCTCTAACCCTGGTTTTTGGGGCATGTTTATTGAAGAAGGGAAGAAGTACAAAGTGGTCTTCTATGTTAGAGCATTAGGACCAATTGATTTGAAAATCTCATTTAAAGGAAAACTTGGCCAAGAGCTAGCTTCTACTAATATCAGGGCATCTGCAAATGATGTTTCAAAGTGGAAAAAGATGGAAACTATTCTTGAAGCCATTGGATCAGATTTTAATTCTAGTCTGCAGATTACAACCACTAAAAAAGGAGTGATTTGGTTGGATCAAGTTTCAGCTATGCCCACTGACACTCATAATGGACATGGTTTTCGTAAGGACTTGTATCAAATGGTGGCAGAGTTGAAACCAAAATTTATTCGATTTCCAGGTGGTACCTTTGTTGAAGGATGGAAATTGAGAAATGCATTCAGGTGGAAAGAAACCATTGGATCTTGGGAGAACAGACCTGGTCACTTTAACGATGCTTGGGACTATTGGACTGATGATGGTTTAGGTTTTCTAGAGATGCTTCAACTCGCAGAAGATCTTGATACACTACCAGTATGGGTATTTAATGCTGGAATCGCTCGTCAGGAAGAAGTCAATACAACTGAGATCGGTCCTTTTGTGCAAGAAGCTCTTGATGGTATAGAATTTGCTAAGGGTCCAGTCACATCAAAGTGGGGCAAGATGAGATCTTCTTTAGGACATCCTAAACCATTTGATCTACGATATGTTGCTATTGGAAATGAGGATTGTGACATGTATAATTATCAAGGGAATTATCTTAAATTCTACAAAGCCATCAAGCATCACTATCCAGATATGCGAATAATTTCAAATTGTGATGCTACTGTAAAACCATTGGACCACCCAGCGGATCTGTTTGACTTTCACATATATACAACTGCTGAGGATATTTTCTCAAAGTACAACAAGTTTGATTCTGTAAGACGTATTGGCGCCAAGGCTTTTGTGAGTGAGTACGCTGTATGGAAAGAAGATGCCGGATTTGGATCCCTCTTATCTGCCTTAGGAGAAGCCGCATTTCTAATGGGATTAGAGAGGAACAGTGATCTGGTGGAAATGGTCTCTTATGCGCCACTTCTTGTAAATTATAATGACCAAAAATGGAAACCAGATGCAATCGTGTTTGATTCATATCGGAGCTATGGAATTCCTAGTTATTACTTGCAACAGCTATTCACACAATCAAGTGGAGCAACATATGTAAACTCAAAACTTGAAGCCCCATCTTCCATTGTCGCATCCGCGATTATTTGGCAAGACAAGGCACGCAACAGGAGTTACTTGAGAATTAAGGTTGTGAATTTTGCTAACAGAGAGACCACTCTTGCTATTAAAATTGATGGCTTGAACCCCAATTTGGATATCTCTGGCTCCACACTCACAGTTCTTACTTCTGGCAATGTCAGAGACGAGAATAGCTTTTACAATCCTGTTAAGGTTGTACCATTGAAAACTCCATTGGAGAATGCTCGGCCTAGCATGAACATCACACTTCCTCCAATTTCAGTGGTATCAATTGACTTCCCAAAATGA 2994 0.4208 MGCGFSAGSKSENPSLKAVNLIHDGKEEDGLIGGSYKVSRLKNFTYNELKTATRNFHPDNMVGEGGFGRVFKGWLDVQTLAPAKPGTGIAIAVKKLNQESFQGHKEWLTEINILGQLHHPNLVKLIGYCSEDEQRLLVYEFLTRGSLDNYLFLRTSHVEPLSWSNRMKIALNAAKVLTFLHSDEVNVIYRDLKAADILLDSNFNAKLSDFGLARAGPLGDESHVSTRVMGTFGYAAPEYIATGHLTKKSDVYTFGVVLLEIMSGKRTLDRSRTAREHNLVEWAKPYLSSKRQIFKVMDARIEGQYLVREAMEVAKIAIQCLSADPQLRLTMADVVRALKQLQDSRDTAGTSEPISSLLIRACAALLLLLFAFASQCNADHHSTATLVVNFESGWRISEHFFGVFFEEINHAGSGGLWSELIRNRGFEAGGTTVPSSISPWSIVGNESTIRVETKIASPFPRNKVAARLDILCESPKDCPHGVGLSNPGFWGMFIEEGKKYKVVFYVRALGPIDLKISFKGKLGQELASTNIRASANDVSKWKKMETILEAIGSDFNSSLQITTTKKGVIWLDQVSAMPTDTHNGHGFRKDLYQMVAELKPKFIRFPGGTFVEGWKLRNAFRWKETIGSWENRPGHFNDAWDYWTDDGLGFLEMLQLAEDLDTLPVWVFNAGIARQEEVNTTEIGPFVQEALDGIEFAKGPVTSKWGKMRSSLGHPKPFDLRYVAIGNEDCDMYNYQGNYLKFYKAIKHHYPDMRIISNCDATVKPLDHPADLFDFHIYTTAEDIFSKYNKFDSVRRIGAKAFVSEYAVWKEDAGFGSLLSALGEAAFLMGLERNSDLVEMVSYAPLLVNYNDQKWKPDAIVFDSYRSYGIPSYYLQQLFTQSSGATYVNSKLEAPSSIVASAIIWQDKARNRSYLRIKVVNFANRETTLAIKIDGLNPNLDISGSTLTVLTSGNVRDENSFYNPVKVVPLKTPLENARPSMNITLPPISVVSIDFPK 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1271 997 Pfam Alpha-L-arabinofuranosidase C-terminal domain 805 989 IPR010720 GO:0046373|GO:0046556
Lele26g1271 997 FunFam Alpha-L-arabinofuranosidase 1 574 880 - -
Lele26g1271 997 FunFam Serine/threonine-protein kinase BIK1 26 141 - -
Lele26g1271 997 Gene3D Phosphorylase Kinase; domain 1 34 141 - -
Lele26g1271 997 SMART alpha_l_af_c 804 989 IPR010720 GO:0046373|GO:0046556
Lele26g1271 997 Gene3D Glycosidases 563 879 - -
Lele26g1271 997 Gene3D Transferase(Phosphotransferase) domain 1 142 355 - -
Lele26g1271 997 CDD STKc_IRAK 62 341 - -
Lele26g1271 997 ProSitePatterns Protein kinases ATP-binding region signature. 62 95 IPR017441 GO:0005524
Lele26g1271 997 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 142 351 - -
Lele26g1271 997 ProSiteProfiles Protein kinase domain profile. 56 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1271 997 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 363 995 - -
Lele26g1271 997 Gene3D - 880 995 IPR013780 -
Lele26g1271 997 SUPERFAMILY Protein kinase-like (PK-like) 38 337 IPR011009 -
Lele26g1271 997 SUPERFAMILY (Trans)glycosidases 557 886 IPR017853 -
Lele26g1271 997 Pfam Protein tyrosine and serine/threonine kinase 60 338 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1271 Lele-ChrLele26 8369941 8379803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1271 357 997 Glycoside Hydrolase AT3G10740 57.887 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele26g1271 PK_Tyr_Ser-Thr 6.2e-46 CL0016