Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1264 ATGGTGTGGAAGAAGAGGCTAGAATATGGATTCAATGGCTTTCAGGTCCCCTTTATTCCTAGAGCTCCTAGATCTGTAAGAAGGAGGGTTCTTTCCAAGAAAGAAGAGGACGGTCATGTTTGTGCCATTGAAGTACTGGCATCTTTAGCTGGCAAGTTGTTGCAGGAGAGTGAAAGTTCAGCTTCTAGCAATGCATCAGAAGGAAATCACCAGCCGGCCTCCGGCCAAGGCGCTGTTGAGCAGGAAAGTCAAGGTGAAGCCAAACCGTTTGTAGCAGAAGGTGTTCATCATGGAAGTTGTGCAGAGAGTGCCTTTATGACTGAGGTAGTCTCACGAAATTCTAGCCTGAAGTATCTTGGGCAAGCTAAGACTGATGCTGTACCAGAATGCACTTCCGTTACTAATCCTGCTGACTGCTGCAAGAAAATTGAACCTAACATTAAGCCTGAAATATGCAAATGGGAGGATCAAGTTGAACATTATTCTAGTAGGTTAGCAGCACCCCGAAATTTTAGGGAGTCTTATAATAATAGTAATATAAACAATGGCTTTAAGAGGGAACAAGAAGCTGGGAGTTCAGGAATTGAGGGACCAAGTCTTGCTGATAAATGTAGTTTGAAGGATCCTTTGGAATTTCGAGTTAAATCTCATGCAATAAGTAACTCAGTTAGTAAAATTAAATATCCATCCTCTAGAGGAATTTTTTCAAATGGTTCCTTTTCTAATCATGGCAATAATAGTAAGGTAGGTTTTAGAGATGATGATGAAAACTTTATTAGGTGCAACAAAATTTGCACCAAATTAAAGGCTTTTAAGCCTCCGCATCGGATTGCACACCGAAGAATCAGGAAGCTCGTGACTTCCAAATACTGGAAGGTTGCTCCGAAGTTGAAGGATTGCGAGCTTTCCAGATCTGATGCTGGAGCAAAGCCTCTTTTTCAGAAGAGGAAGGCTTGTCACAGTTTTGAAAGAGGTCATTATGATACTCTTTCCAAGAGGAGGAAATTCTCTAATCGGTGTTCAGGACTGACACTTAATGGAGGATTCAGTAGTGAGAGTGTATCTAATTCACTTGAGAAAGGAATGGATGGCAACAACCCTAGCTTATCTTCAAAACAGCTTGAGTCGAAGGATTCTCATGTGAAGTTTAGCATTAAGTCTTTCAAGATACCAGAGCTTTATATTGAGGTTCCTGAAACTGCTACTGTCGGTTCTCTAAAGAGGACGGTCATGGAGGCTGTGATGGCTATACTTGGGGATGGAGTGCATGTTGGTGTTGTTCTTCAGGGGAAGAAAGTTAGAGATGACAACAGAACTCTTCAGCAGACTGGTTTATCTTGTGAAGAAAATATCGATACCCTTGGTTTCACGTTGGAGCCGAGTTCCTTACAAGGCTCTCCTGTATGCGTTGGTGATCCTTCTTATCACGAACCGTCCCATTCAATCAGGTCCCCTAGAACTCCTATCTTAGATTCGGGGATTACTGATGTCTTACATGACTCTCCCTTGCTGACTACTCCGATTGACGCTATTGAAAGTAACCATGAATCAATTTCTTCTCCCACTGACACCATGACTGACAAAGTAGAGCCAGATTCCAAAACCTTAGTAGTTGTTCCTGATAGGAGCACAGAACCATTGACTATAGTTCCAGCGACTCAGAAAGCTAAGCGCTTTGAGCTTGTACAGCGTCGAACCAGGAGACCCTTCTCAGTGTCTGAGGTAGAAGCACTTGTTCAGGCTGTTGAAGAACTTGGAACCGGAAGGTGGCGTGATGTTAAGCTGCTTGCTTTTGAAAATGCAGACCATAGGACTTATGTTGACTTGAAGGACAAATGGAAAACGTTAGTACACACAGCAAGAATATCTCCCCAACAAAGAAGAGGAGAGCCAGTACCTCAGGAGCTGTTGAACAGAGTGTTGGCTGCCCATGCTTTCTGGTCACAGCATCAAGGCAAGCAGCAACAACATGGGAAGCATCAACAACAACCTCCGGCAACTCCAAACAAGGTCAAAGAATCCTCATCAGCTCCTCAATGTCTCAGTCTTGTTGCTGGTGAAGCTGGTGGTGGTGTCATCCAACCCATTGGAACAATGTAA 2100 0.4348 MVWKKRLEYGFNGFQVPFIPRAPRSVRRRVLSKKEEDGHVCAIEVLASLAGKLLQESESSASSNASEGNHQPASGQGAVEQESQGEAKPFVAEGVHHGSCAESAFMTEVVSRNSSLKYLGQAKTDAVPECTSVTNPADCCKKIEPNIKPEICKWEDQVEHYSSRLAAPRNFRESYNNSNINNGFKREQEAGSSGIEGPSLADKCSLKDPLEFRVKSHAISNSVSKIKYPSSRGIFSNGSFSNHGNNSKVGFRDDDENFIRCNKICTKLKAFKPPHRIAHRRIRKLVTSKYWKVAPKLKDCELSRSDAGAKPLFQKRKACHSFERGHYDTLSKRRKFSNRCSGLTLNGGFSSESVSNSLEKGMDGNNPSLSSKQLESKDSHVKFSIKSFKIPELYIEVPETATVGSLKRTVMEAVMAILGDGVHVGVVLQGKKVRDDNRTLQQTGLSCEENIDTLGFTLEPSSLQGSPVCVGDPSYHEPSHSIRSPRTPILDSGITDVLHDSPLLTTPIDAIESNHESISSPTDTMTDKVEPDSKTLVVVPDRSTEPLTIVPATQKAKRFELVQRRTRRPFSVSEVEALVQAVEELGTGRWRDVKLLAFENADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLNRVLAAHAFWSQHQGKQQQHGKHQQQPPATPNKVKESSSAPQCLSLVAGEAGGGVIQPIGTM 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1264 699 CDD SANT_TRF 568 618 - -
Lele26g1264 699 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 563 621 IPR017930 -
Lele26g1264 699 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 660 IPR031105 -
Lele26g1264 699 SUPERFAMILY Ubiquitin-like 376 456 IPR029071 -
Lele26g1264 699 MobiDBLite consensus disorder prediction 355 374 - -
Lele26g1264 699 ProSiteProfiles Myb-like domain profile. 562 617 IPR001005 -
Lele26g1264 699 MobiDBLite consensus disorder prediction 57 81 - -
Lele26g1264 699 MobiDBLite consensus disorder prediction 57 85 - -
Lele26g1264 699 SUPERFAMILY Homeodomain-like 568 649 IPR009057 -
Lele26g1264 699 SMART sant 566 619 IPR001005 -
Lele26g1264 699 MobiDBLite consensus disorder prediction 648 677 - -
Lele26g1264 699 MobiDBLite consensus disorder prediction 355 375 - -
Lele26g1264 699 Gene3D - 555 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1264 Lele-ChrLele26 8317193 8320701 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1252 25 8364994 8368405 Lele26g1264 26 8317193 8320701 ECH
Lele41g0048 41 350904 354512 Lele26g1264 26 8317193 8320701 ECH
Lele42g0048 42 375503 378796 Lele26g1264 26 8317193 8320701 ECH
Lele43g1311 43 21239927 21244822 Lele26g1264 26 8317193 8320701 ECH
Lele44g1303 44 21293703 21300749 Lele26g1264 26 8317193 8320701 ECH
Lele26g1264 26 8317193 8320701 Lele26g1264 26 8317193 8320701 ECH
Lele26g1264 26 8317193 8320701 Lele27g0831 27 16347726 16351111 hybridization
Lele26g1264 26 8317193 8320701 Lele28g1256 28 8351355 8354864 hybridization