Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1261 ATGTTCAATTTCCAAACCATGGGCGATGCTATTGATTTGACTGGTGATGGAGGTGTCGTAAAGACAATTGTGAAAAGAAGCAAAGTTGATGCTGTGGGTCCTACTGAAGATTTTCCCCTTGTTGATGTTCATTATGAAGGAACACTTGCTGATACTGGTGAAGTATTTGATACCACACATGAGGATAACACTGTATTCACTTTCGAGGTTGGAAAGGGCAGTGTTATCAAGGCTTGGGACATTGCAGTGAAGACCATGAAGGTTGGAGAAATTGCAAAAATTACTTGCAAGCCGGAATATGCATATGGCAGTGCAGGATCTCCACCAGATATCCCCCCAGATGCGACACTTGTTTTTGAAGTTGAGCTAGTTGCATGTAAGCCCCGGAAGGGTTCCAGTCTGGGAAGTGTTTCAGACGAGAGGGCCAGGCTAGAAGAGCTGAAGAAGCAGAGAGAGATCGCTGCTGCGGCCAAAGAGGAGGAGAAAAGGAAGAGAGAGGAAGCAAAAGCTGCTGCTGCTGCTCGTGTGCAAGCCAAGTTAGAGGCCAAGAAAGGCCAAGGAAAGGGTAAATCGAAAGCAAAGTAG 585 0.4632 MFNFQTMGDAIDLTGDGGVVKTIVKRSKVDAVGPTEDFPLVDVHYEGTLADTGEVFDTTHEDNTVFTFEVGKGSVIKAWDIAVKTMKVGEIAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVACKPRKGSSLGSVSDERARLEELKKQREIAAAAKEEEKRKREEAKAAAAARVQAKLEAKKGQGKGKSKAK 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1261 194 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 11 187 - -
Lele26g1261 194 SUPERFAMILY FKBP-like 14 130 - -
Lele26g1261 194 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 40 124 IPR001179 GO:0003755
Lele26g1261 194 Gene3D - 4 126 IPR046357 GO:0003755
Lele26g1261 194 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 38 127 IPR001179 GO:0003755
Lele26g1261 194 MobiDBLite consensus disorder prediction 155 172 - -
Lele26g1261 194 Coils Coil 137 176 - -
Lele26g1261 194 FunFam Peptidylprolyl isomerase 7 126 - -
Lele26g1261 194 MobiDBLite consensus disorder prediction 155 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1261 Lele-ChrLele26 8254703 8257257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1261 11 161 Calmodulin-binding Proteins AT5G48570 32.692 4.39e-12 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1261 26 8254703 8257257 Lele26g1261 26 8254703 8257257 ECH
Lele26g1261 26 8254703 8257257 Lele27g0835 27 16413056 16415194 hybridization
Lele26g1261 26 8254703 8257257 Lele28g1253 28 8284498 8287449 hybridization