Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1246 ATGGCGAATCGGTGGTGGGCTGGTAACGTTTCAATGAGACCTAATAAAGATCCCTTGTTGTCTTCTCCATCGCTTCAGCTGAGAAACCCAGAAGACGACCATGGCGGATTCAATCGACTCGGGCCAAGACGAGAGCAAGATTTTCTGGAAAACAACACAACTCCAACCAATAGCAGCAATAGCAACAATAACGCCAACACAAACACAACCTCGCATAGCCAGAACATCGTCGACGACGACGAGAGCCGACACAAAAGTAGCCGCGAAGCAGATGATCAAAACCCAGGTAGCCATGACGGCGCGGCAGAGCCGGGAAGCAGCAGCAGACGACGTCCCCGAGGCCGCCCATCCGGGTCGAAGAACAAGCCAAAGGCACCGGTGGTTGTGACAAAGGAGAGTCCTAATGCCCTCCGGAGCCACGTGTTGGAAATCTCCAGCGGCAGCGATGTTGCCGAGAGCCTCTCCACCTTCGCTAACCGGAGACACCGCGGGGTGTCAGTGCTAAGCGGAAGTGGCATTGTAACCAATGTCACTCTCCGGCATCCGGCGATGCCAGGTGGCGTTATCACACTAAATGGACGGTTCGAGATCCTGTCACTATCCGGGGCGTTTTTGCCGGCCCCTTCTGCGGCTGGAGCCACCGGGCTAACCGTGTATCTCGCCGGCGGACAAGGGCAAGTTGTTGGTGGAAATGTGGTGGGTTCATTGGTGGCATCAGGGCCCGTATTGGTGATTGCAGCGACATTCGCTAATGCGACATATGAGAGATTGCCGCTTGAAGATGAACCATCTGGGGAAGATAATGTAGAAGTGCAAGCACAGCAACAATCTGGTGTAAATTCAGGAACTTCTGGTGGGATTCCTTCAACATCTCAAGCTTTGAATGAACAAGTTTCAATGCGAATGTTCAATAACATGCCACCAAATTTGCTACAACCAAGTAATGATCAAATGCCACATGATGTGTTCTGGGCGCCTCCTGCTCGCCAACCTCCTTATTGA 1002 0.5269 MANRWWAGNVSMRPNKDPLLSSPSLQLRNPEDDHGGFNRLGPRREQDFLENNTTPTNSSNSNNNANTNTTSHSQNIVDDDESRHKSSREADDQNPGSHDGAAEPGSSSRRRPRGRPSGSKNKPKAPVVVTKESPNALRSHVLEISSGSDVAESLSTFANRRHRGVSVLSGSGIVTNVTLRHPAMPGGVITLNGRFEILSLSGAFLPAPSAAGATGLTVYLAGGQGQVVGGNVVGSLVASGPVLVIAATFANATYERLPLEDEPSGEDNVEVQAQQQSGVNSGTSGGIPSTSQALNEQVSMRMFNNMPPNLLQPSNDQMPHDVFWAPPARQPPY 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1246 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 66 325 IPR014476 GO:0003680
Lele26g1246 333 CDD DUF296 138 221 IPR005175 -
Lele26g1246 333 SUPERFAMILY AF0104/ALDC/Ptd012-like 134 262 - -
Lele26g1246 333 MobiDBLite consensus disorder prediction 47 75 - -
Lele26g1246 333 MobiDBLite consensus disorder prediction 76 96 - -
Lele26g1246 333 MobiDBLite consensus disorder prediction 1 129 - -
Lele26g1246 333 MobiDBLite consensus disorder prediction 312 333 - -
Lele26g1246 333 MobiDBLite consensus disorder prediction 32 46 - -
Lele26g1246 333 FunFam AT-hook motif nuclear-localized protein 137 264 - -
Lele26g1246 333 ProSiteProfiles PPC domain profile profile. 134 272 IPR005175 -
Lele26g1246 333 Gene3D - 137 277 - -
Lele26g1246 333 Pfam Plants and Prokaryotes Conserved (PCC) domain 138 250 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1246 Lele-ChrLele26 8155423 8156424 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1246 1 332 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 50.291 4.01e-73 227