LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele26g1245	ATGGTAATCTCTACGCCCCTTCTCATACTAACCGGCACCAGACAACAACTTCCTTCCCCACCACCGCCAACCCCAGGGCCTGAAGAGATAGATAGGCTTCATTCATTTGATCGGTGGTATTCAAAAATGGCGAATCGGTGGTGGGCTGGTAACGTGGCAATCAGACCAAAAGATCCTTTGTCGTCTTCTCCATCACTTCATCTGAGAAACCCAGAAGACGACCATGGTGGGTTGAACCGATTCGGTATCGTACGAGTTCAAGATTTTCTGGAAAACACCAATAACAACACCACTACTCCGACCAATAGCAGCAACAGTAACACTAACGCCAACACAAACACCACCACGCAGAACGCCGACGACGGCGACAGCCGAGATAACGCCCGCGAAGCTGATGATCAAAACCCAGGTAGCTACGACAGCACGGAGCCGGGCGGCAGCAGTGGTCGCCGGCCCCGAGGCCGCCCTGCTGGGTCGAAGAACAAGCCGAAGCCTCCTGTTGTTTTAACAAAGGAGAGTCCTAATGCCCTCCGGAGCCATGTGTTGGAAATCTCCAGCGGCAGCGATGTTGCCGAGAGCCTCTCCACCTTCGCGAACCGGCGACACCGTGGGGTGTCGGTGCTAAGCGGAAGTGGCATTGTAACCGATGTCACTCTCCGGCAACCGGCAGCAGCAGCTGGGGTTATCACACTAAATGGAAGGTTCGAGATCCTGTCGCTATCCGGGGCATTTTTGCCGGCCCCGTCACCGCCCGGGGCGACCGGGCTAACGGTGTATCTCGCCGGTGGACAAGGGCAGGTTGTCGGTGGAGCTGTGGTGGGATCACTGGTGGCGTCAGGGCCTGTTTTGGTGATTGCAGCAACATTCGCAAATGCCACTTATGATAGATTACCACTTGAAGCTGAACTATCTGGGGAAGAAGTTGAAGCGAAAACACAGCAGCAACAATCAGGAGTGAATAATTCAGCTTCTTCTGGGCCTCCTTCAACATCTCAAGCTTTGAACGAACAAGTTTCGATGCCACTGTTCAATAATTTGCCGCCAAATTTGATACCAAACAATGATCAAATGCAACAACATGAAGTGTTCTGGGGAGCCCCTGCTCGCCATCCTCCTTCTTACTGA	1125	0.5324	MVISTPLLILTGTRQQLPSPPPPTPGPEEIDRLHSFDRWYSKMANRWWAGNVAIRPKDPLSSSPSLHLRNPEDDHGGLNRFGIVRVQDFLENTNNNTTTPTNSSNSNTNANTNTTTQNADDGDSRDNAREADDQNPGSYDSTEPGGSSGRRPRGRPAGSKNKPKPPVVLTKESPNALRSHVLEISSGSDVAESLSTFANRRHRGVSVLSGSGIVTDVTLRQPAAAAGVITLNGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGAVVGSLVASGPVLVIAATFANATYDRLPLEAELSGEEVEAKTQQQQSGVNNSASSGPPSTSQALNEQVSMPLFNNLPPNLIPNNDQMQQHEVFWGAPARHPPSY	374

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele26g1245	374	MobiDBLite	consensus disorder prediction	308	333	-	-
	Lele26g1245	374	MobiDBLite	consensus disorder prediction	305	333	-	-
	Lele26g1245	374	MobiDBLite	consensus disorder prediction	92	174	-	-
	Lele26g1245	374	MobiDBLite	consensus disorder prediction	59	79	-	-
	Lele26g1245	374	CDD	DUF296	178	260	IPR005175	-
	Lele26g1245	374	ProSiteProfiles	PPC domain profile profile.	174	311	IPR005175	-
	Lele26g1245	374	FunFam	AT-hook motif nuclear-localized protein	177	304	-	-
	Lele26g1245	374	MobiDBLite	consensus disorder prediction	92	121	-	-
	Lele26g1245	374	Pfam	Plants and Prokaryotes Conserved (PCC) domain	178	290	IPR005175	-
	Lele26g1245	374	SUPERFAMILY	AF0104/ALDC/Ptd012-like	174	300	-	-
	Lele26g1245	374	PANTHER	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	108	366	IPR014476	GO:0003680
	Lele26g1245	374	Gene3D	-	177	314	-	-
	Lele26g1245	374	MobiDBLite	consensus disorder prediction	11	30	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele26g1245	Lele-ChrLele26	8143278	8145175	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele26g1245	43	374	AT-hook Motif Nuclear Localized (AHL) Family	AT3G55560	53.372	6.57e-81	248