Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1238 ATGTTGAAGACGTCATCATGGGAAGAGCTGGCTTTTGCAGAAGACGCAGCAAGGATACTTGGTGGCTACGTATGGCCTCCAAGATCTTACTGTTGCAGTTTCTGCAAAAGAGAGTTCAGGTCTGCACAAGCTCTTGGGGGTCACATGAATGTTCACCGGAGGGATAGAGCCAGGCTCAAACAGAGCCATCAGCAACAAACTGTAATTCCTCATCATCATGATTCTAAGAGATCTTCTGATTCTTCAGAGGTCAATAGAAGGGAAGAAGAAGATTTTGCAGGCTTCATCAGTCATGGGAATAATAATGATAATAATAATTATGTTGAAACAGACTTGTCCGTGGGATTACTACCTTCATCATCATCAGCTGAAGAAGCTTCTTTAAGTTGTAAGAGAACTAAGATTTCTTCCAATATTTCTTCAGTCTTCATCAAGCCATTCTCAAACGATCAAGCAGCAGCAGCAGCAGCAAGCCTGGTTTTCCATTCTGCAGAAATGGCGATCGGAGTTCATAAGCCTAAAATGGAAGACTTGGATCTTGAACTCAGGCTGGGGAAATCACAGAAAGTTAAGTGA 576 0.4253 MLKTSSWEELAFAEDAARILGGYVWPPRSYCCSFCKREFRSAQALGGHMNVHRRDRARLKQSHQQQTVIPHHHDSKRSSDSSEVNRREEEDFAGFISHGNNNDNNNYVETDLSVGLLPSSSSAEEASLSCKRTKISSNISSVFIKPFSNDQAAAAAASLVFHSAEMAIGVHKPKMEDLDLELRLGKSQKVK 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1238 191 ProSiteProfiles Zinc finger C2H2 type domain profile. 30 57 IPR013087 -
Lele26g1238 191 SUPERFAMILY beta-beta-alpha zinc fingers 27 57 IPR036236 -
Lele26g1238 191 Pfam C2H2-type zinc finger 30 54 - -
Lele26g1238 191 MobiDBLite consensus disorder prediction 55 87 - -
Lele26g1238 191 ProSitePatterns Zinc finger C2H2 type domain signature. 31 52 IPR013087 -
Lele26g1238 191 Gene3D Classic Zinc Finger 27 92 - -
Lele26g1238 191 MobiDBLite consensus disorder prediction 67 87 - -
Lele26g1238 191 PANTHER OS07G0101800 PROTEIN 4 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1238 Lele-ChrLele26 8110388 8110963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1238 3 65 C2H2 Transcription Factor Family AT2G37740 77.778 4.60e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele26g1238 zf-C2H2_6 1.2e-07 CL0361