Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1229 ATGGACGCCGCAGATCCTTGTCGAGATTTCGTCAAGGACGTTAGGCGCGTTGTCATCAAGGTTGGGACTGCTGTTGTGACCCGTAGTGATGGAAGATTAGCGGTTGGAAAATTGGGGACGCTCTGTGAGCAGATTAAAGAGCTTAACTCTCTAGGATATGAGGTTATTTTGGTGTCATCTGGTGCTGTTGGCCTTGGTCGCCAAAGGCTTAGATACAGGAAATTACTTAACAGCAGCTTTGCTGATTTACAAAAGCCACAAGTTGAACTTGATGGCAAAGCATGCGCAGCAGTTGGACAAAATAGTCTAATGGCCATATATGATGCTTTGTTCACTCAGCTTGATGTGACATCAGCTCAGCTTCTTGTGACAGACAATGATTTTAGAGATAGAGATTTCAGAAAGCAACTTACTGAAACTGTAAAATCTTTGTTATCACTGAAAGTCATACCCATATTCAATGAAAACGATGCAGTCAGTACTAGGAAAGCTCCATATGAGGATTCTTCTGGTATATTTTGGGACAATGACAGTTTATCAGCTTTACTGGCCTTGGAATTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTGGAGGGTCTTTATAGTCGCCCTCCGAGTGACCCAAACTCAAGGCTTATTCATACATACGTCAAGGAAAAGCATCAGAATGAAATTACTTTTGGAGAGAAATCTAGGGTGGGAAGAGGTGGAATGACTGCCAAGGTAAAGGCTGCTGTAAATGCAGCTGAAGCTGGCATTCCTGTTATTATTACCAGTGGTTATGCACCTGATAATATCCTTAAAGTTCTTCAAGGACAATGTATTGGAACCCTCTTCCATAAAGATGCTCATAAGTGGGCCCCAGTAAAAGAGGTATCAGCACGTGCAATGGCAGTTGCAGCTAGGGACTGCTCTAGAAGGCTTCAGGCTTTATCTGAAGAAGAGAGGAAGCAAATTTTGCTAAATATAGCTGATGCCCTGGAAGCAAATGAAAAAGAGATAAGGATTGAAAATCAGGCTGATGTCGCTGATGCACAACAAGCAAATCTTGATAAATCCTTGGTTGCTAGGTTGCTTCTAAAGCCTGGGAAGGCAAGACAATCTCCCACTTTAAGAACTTGCATAAATTTTAACCTAGTGTATGGATGGTGTAAATTTGAACTCACCACAGAAATTTTAATGGTATATTTTATTAACGGACAGATTGCAAGCCTTGCAAAGAACATGAGAACTCTTGCAAACATGGAAGATCCAATTGGTCGAGTATCAAAACGAACTGAGGTTGCAGATGGGCTAGTTCTAGAGAAAACGTCATCTCCTTTAGGTGTTCTCTTGATTGTTTTTGAATCCCGCCCTGATGCCCTAGTACAGATAGCTTCCTTGGCAATTCGAAGTGGGAATGGACTTCTCTTAAAAGGAGGCAAGGAGGCTAAGCGATCAAATGCAATTTTGCACAAAGTAATTGCTGAAGCCATCCCCAAAACTGTTGGTGGAAAACTTATTGGACTTGTGACCTCAAGAGCGGAGATCCCTGAGCTGCTTAAGCTTGATGATGTAATTGATCTGGTTATCCCACGAGGCAGCAACAAACTTGTCTCTACTATTAAAAGTTCCACTAAAATTCCTGTTCTGGGTCATGCTGATGGAATTTGCCACATATATGTTGATAAGTCTGCTAATATGGAGATGGCTAGGCGGATTGTATTGGATGCAAAAATAGATTATCCTGCTGGTTGCAATGCCATGGAAACACTTCTTGTTCACAAGGACGTAGCAGAGGAAGGTTGGCTAAATGATATTAGTGTTGACCTACGGAATGAAGGTATTACTTTATATGGAGGACCTAAGGCAAGCTCATTGTTGAATATCCCAAAGGCGCATTCATTTCATCATGAATACAGTTCATTGGCTTGCACTGTTGAGATTGTGGATGATGTGTATTCAGCTATTGATCATATAAATCATCATGGAAGGCATGTCACTGTTGTGTTTTTGACTAGAAACATTGCACATACTGATTGTATAATTGCTGAAGATTGCAAAGTTGCTGATGTGTTTCTACGCCAAGTCGACAGTGCTGCTGTTTTTCACAATGCTAGCACAAGATTTTGTGATGGAGCAAGATTTGGACTGGGTGCAGAGGTTGGAATAAGTACAAGCAGGATTCATGCTCGGGGTCCCGTCGGAGTCGAAGGATTGTTAACAACCAGATGGATACTTAGAGGAAATGGACAAGTAGTTGATGGAGATAAAGGAGTTGTTTACACCCACAAAGACCTCACCACTTGA 2292 0.4171 MDAADPCRDFVKDVRRVVIKVGTAVVTRSDGRLAVGKLGTLCEQIKELNSLGYEVILVSSGAVGLGRQRLRYRKLLNSSFADLQKPQVELDGKACAAVGQNSLMAIYDALFTQLDVTSAQLLVTDNDFRDRDFRKQLTETVKSLLSLKVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLSALLALELKADLLVLLSDVEGLYSRPPSDPNSRLIHTYVKEKHQNEITFGEKSRVGRGGMTAKVKAAVNAAEAGIPVIITSGYAPDNILKVLQGQCIGTLFHKDAHKWAPVKEVSARAMAVAARDCSRRLQALSEEERKQILLNIADALEANEKEIRIENQADVADAQQANLDKSLVARLLLKPGKARQSPTLRTCINFNLVYGWCKFELTTEILMVYFINGQIASLAKNMRTLANMEDPIGRVSKRTEVADGLVLEKTSSPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAKRSNAILHKVIAEAIPKTVGGKLIGLVTSRAEIPELLKLDDVIDLVIPRGSNKLVSTIKSSTKIPVLGHADGICHIYVDKSANMEMARRIVLDAKIDYPAGCNAMETLLVHKDVAEEGWLNDISVDLRNEGITLYGGPKASSLLNIPKAHSFHHEYSSLACTVEIVDDVYSAIDHINHHGRHVTVVFLTRNIAHTDCIIAEDCKVADVFLRQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGQVVDGDKGVVYTHKDLTT 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1229 763 TIGRFAM proA: glutamate-5-semialdehyde dehydrogenase 400 737 IPR000965 GO:0004350|GO:0006561
Lele26g1229 763 TIGRFAM proB: glutamate 5-kinase 15 286 IPR005715 GO:0005737|GO:0006561
Lele26g1229 763 SUPERFAMILY ALDH-like 401 747 IPR016161 GO:0016491
Lele26g1229 763 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 1 762 - -
Lele26g1229 763 Hamap Glutamate 5-kinase [proB]. 15 291 IPR005715 GO:0005737|GO:0006561
Lele26g1229 763 Gene3D - 5 285 IPR036393 -
Lele26g1229 763 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 286 372 IPR016162 GO:0016491
Lele26g1229 763 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 402 746 IPR016162 GO:0016491
Lele26g1229 763 SUPERFAMILY Carbamate kinase-like 15 280 IPR036393 -
Lele26g1229 763 PIRSF P5C_synthetase 1 377 IPR005766 GO:0003824|GO:0006561
Lele26g1229 763 PIRSF P5C_synthetase 390 763 IPR005766 GO:0003824|GO:0006561
Lele26g1229 763 PRINTS Glutamate 5-kinase family signature 96 124 IPR001057 GO:0005524|GO:0016301
Lele26g1229 763 PRINTS Glutamate 5-kinase family signature 136 157 IPR001057 GO:0005524|GO:0016301
Lele26g1229 763 PRINTS Glutamate 5-kinase family signature 234 254 IPR001057 GO:0005524|GO:0016301
Lele26g1229 763 PRINTS Glutamate 5-kinase family signature 175 202 IPR001057 GO:0005524|GO:0016301
Lele26g1229 763 PRINTS Glutamate 5-kinase family signature 52 66 IPR001057 GO:0005524|GO:0016301
Lele26g1229 763 Pfam Amino acid kinase family 16 260 IPR001048 -
Lele26g1229 763 SUPERFAMILY ALDH-like 296 365 IPR016161 GO:0016491
Lele26g1229 763 FunFam Delta-1-pyrroline-5-carboxylate synthase 549 706 - -
Lele26g1229 763 ProSitePatterns Glutamate 5-kinase signature. 232 249 IPR019797 GO:0004349|GO:0006561
Lele26g1229 763 CDD ALDH_F18-19_ProA-GPR 296 744 IPR000965 GO:0004350|GO:0006561
Lele26g1229 763 Hamap Gamma-glutamyl phosphate reductase [proA]. 294 748 IPR000965 GO:0004350|GO:0006561
Lele26g1229 763 FunFam Delta-1-pyrroline-5-carboxylate synthase 4 287 - -
Lele26g1229 763 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 549 706 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1229 Lele-ChrLele26 8025783 8034998 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1231 26 8038920 8041368 Lele26g1229 26 8025783 8034998 CCT
Lele27g0862 27 16659890 16662680 Lele26g1229 26 8025783 8034998 CCT
Lele28g1224 28 8049182 8052679 Lele26g1229 26 8025783 8034998 CCT
Lele25g1213 25 8048935 8056093 Lele26g1229 26 8025783 8034998 CCT
Lele25g1213 25 8048935 8056093 Lele26g1229 26 8025783 8034998 ECH
Lele26g1229 26 8025783 8034998 Lele26g1229 26 8025783 8034998 ECH
Lele26g1229 26 8025783 8034998 Lele27g0865 27 16671551 16675439 hybridization
Lele26g1229 26 8025783 8034998 Lele28g1222 28 8035421 8040302 hybridization