Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1205 ATGGCAGCTTTGTCCAAGAAGACTGAGCATTTTCAGAAGAAGAAAGATGGGGTTCGGTCCTCTGGGGGTAAAACGGCTAAATCTGAGTCGTTCACCGATTCCAGTGCTGAGTCCAAAGAGACGAGTTCGAGTGCGTCGAGCTCCTTCGATTCAACTGAAGAAACTAAAGCAAAAGGGTCGTCTTCGCCTACTCCTCTTGGCTGGCCCATTCGCAAGGCTACAATTTCCAAGTGCAGTAAATCTGATGACAAGGAAAACCAACCTGTTTCCCATGAAGACAGCTCAAAATTTAGCAGAATCGGTTCAAAAATGTCAGAGATTGATATGATGAAGGAAAGATTTGCAAAATTACTGCTTGGTGAAGACATGTCAGGGTCTGGAAAAGGGGTTTGCACAGCTCTGGCTATCTCTAATGCTATTACTAATCTCTGTGCCACCGTATTTGGGCAATTATGGAGACTAGAACCTCTATCTGATGGAAAGAAAGCAATGTGGCGAAGAGAAATGGAGTGGCTTCTTTGCGTTGGTGATCACATTGTCGAATTAATCCCTTCTTGGCAAACATTTCCAGATGGAAGCAAGCTTGAGGTAATGACTTGCAGGCCGAGGTCGGATCTTTTCATGAATCTTCCAGCCCTTCGCAAACTCGACAACATGCTAATGGAAATATTAGACAGTTTCACAAGTAGAGAGTTTTGGTACGTTGATCAAGGAATTGTGGCCCCAGATGCAGATGGGTCAGGCTCATTTCGCAAGCCAATGCAGAGACAAGAGGAGAAATGGTGGCTTCCTGTGCCTCGTGTGCCTCCTTCAGGTCTGACTGAGAACTCGAGAAAGCAATTGAACCACACACGAGAATGTGCAAACCAAATTCTGAAAGCAGCCATGGCTATCAACGACAATGCTTTAGCTGAAATGGAAGTTCCTGATTCTTACCTAGAAGCCCTCCCCAAGAATGGAAGAAGCTGCCTGGGGGATTTCATATACCGTTACATAACATCAGATCAGTTCTCTGCAGAGGGTCTGCTTGATTGCCTCGACCTTTCCAATGAACATGTGGCTCTGGAGATTGCTAACAGAGTGGAAGCTTCTATATATGTATGGCGTAGAAGGGCTCATTCGAGACCCCCACCTAATAATCCTAGCCGTTCAACAGCAAAATCATCCTGGGAAATGGTCAGAGATTTCATGGCTGATGGAGACAAGAGAGAATTGCTCGCGGAAAGAGCTGAAAACTCTCTGCTTTCCTTGAAACAGAGGTTCCCTGGTTTAACTCAAACCACTCTCGACACCAGCAAGATCCAATGCAACAAGGACGTGGGTAAGTCAATTCTGGAGAGCTATTCAAGGGTATTGGAGAGCATGGCATTTAACATTCTGGCTCGTATTGATGATTTGCTGTACGTGGACGACTTGACAAAACATTCAGACAGGTTTCCGTTGGTTTCATCGACGGTTAGTCAGCATTCTCAGCAGAAGTTGTCTCGTCCAATATCGGTGTCTGTCTCAGGCACTCCTCGCAAATCTGTTAATGGCACCAATAATAACTTTTCACCAGCACCTCCTCTCATTAGTCCTGCAAGAGGAGAGAGAACTCCCTTCATCCACAACAACAACAACATCATGAAACCTCATCGTCGCGGTTTTGGGGTGAAAAGGGTATTGTCGAATTATCTTGGGGTAGATACGAAAGCCAAAATATGCAGCAATTCAAGTGAAGTGAATTGTTTGAACACAAGTACAGCAGATAGAACAGAAACAGAACAACAACATGAACGTTCAAGTGGTCTGAAAAAATGA 1800 0.4494 MAALSKKTEHFQKKKDGVRSSGGKTAKSESFTDSSAESKETSSSASSSFDSTEETKAKGSSSPTPLGWPIRKATISKCSKSDDKENQPVSHEDSSKFSRIGSKMSEIDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLSDGKKAMWRREMEWLLCVGDHIVELIPSWQTFPDGSKLEVMTCRPRSDLFMNLPALRKLDNMLMEILDSFTSREFWYVDQGIVAPDADGSGSFRKPMQRQEEKWWLPVPRVPPSGLTENSRKQLNHTRECANQILKAAMAINDNALAEMEVPDSYLEALPKNGRSCLGDFIYRYITSDQFSAEGLLDCLDLSNEHVALEIANRVEASIYVWRRRAHSRPPPNNPSRSTAKSSWEMVRDFMADGDKRELLAERAENSLLSLKQRFPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNILARIDDLLYVDDLTKHSDRFPLVSSTVSQHSQQKLSRPISVSVSGTPRKSVNGTNNNFSPAPPLISPARGERTPFIHNNNNIMKPHRRGFGVKRVLSNYLGVDTKAKICSNSSEVNCLNTSTADRTETEQQHERSSGLKK 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1205 599 Gene3D PRONE domain, subdomain 1 99 339 - -
Lele26g1205 599 Gene3D PRONE domain, subdomain 1 340 479 - -
Lele26g1205 599 MobiDBLite consensus disorder prediction 490 528 - -
Lele26g1205 599 ProSiteProfiles PRONE domain profile. 97 480 IPR005512 GO:0005085
Lele26g1205 599 MobiDBLite consensus disorder prediction 1 101 - -
Lele26g1205 599 MobiDBLite consensus disorder prediction 7 22 - -
Lele26g1205 599 MobiDBLite consensus disorder prediction 490 521 - -
Lele26g1205 599 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 27 536 IPR038937 GO:0005085
Lele26g1205 599 MobiDBLite consensus disorder prediction 23 62 - -
Lele26g1205 599 MobiDBLite consensus disorder prediction 579 599 - -
Lele26g1205 599 FunFam Rop guanine nucleotide exchange factor 1 98 338 - -
Lele26g1205 599 MobiDBLite consensus disorder prediction 76 101 - -
Lele26g1205 599 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 105 474 IPR005512 GO:0005085
Lele26g1205 599 MobiDBLite consensus disorder prediction 585 599 - -
Lele26g1205 599 FunFam Rop guanine nucleotide exchange factor 14 339 479 - -
Lele26g1205 599 FunFam Rop guanine nucleotide exchange factor 7 307 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1205 Lele-ChrLele26 7882069 7884434 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1198 25 7927298 7929706 Lele26g1205 26 7882069 7884434 CCT
Lele26g1196 26 7782278 7786532 Lele26g1205 26 7882069 7884434 CCT
Lele27g0888 27 16880523 16882225 Lele26g1205 26 7882069 7884434 CCT
Lele28g1188 28 7752864 7758577 Lele26g1205 26 7882069 7884434 CCT
Lele25g1190 25 7839753 7841052 Lele26g1205 26 7882069 7884434 CCT
Lele25g1198 25 7927298 7929706 Lele26g1205 26 7882069 7884434 ECH
Lele26g1205 26 7882069 7884434 Lele26g1205 26 7882069 7884434 ECH
Lele26g1205 26 7882069 7884434 Lele27g0880 27 16794877 16797288 hybridization
Lele26g1205 26 7882069 7884434 Lele28g1197 28 7840679 7843305 hybridization