Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1200 ATGGTGGTCACAGAGAAGTCTCATGTTGTTGTTGATATAGTAGTAGATAATGGTGGTCGGCGTAGCAGCTCCGTCGGTGGCGGTGGCGATGGGGGGCATCCAGACGCTGCCGACAGTGTAGATAAGGAGCAAAAATCTTCCCACGAGGCATCTGGTGCCGAGATTGTGGGGGTGTCGGAAAAAGAGCAGGGATCCTCTGCATCGGAGTGTTCGGTGGAGGTGGATTTGGAGAATGCGGTGACTGAAACTAAGGTACATTTGGGTGAAGTGATGAAGAGGGATTGTAGGATTTGCCATCTTAGTATGGATATGACAAATCATGAATCTGGGAGCATGGAGCTCGGATGTTCTTGCAAGGACGATTTGGTTGCTGCTCACAAGCAATGTGCTGAGGCTTGGTTCAAGATCAAGGGAAACAAAACCTGTGAAATCTGTGGATCAATTGCACGCAATGTAACTGGAACGTTTGAAGTGGAAACAGTTGAACAGTGGAACGAGTCAACCGATGCCAGCATGGCAGCGCCAACTGGACCTGCTCCGTCACATGGGGAAAATAGAAGTTTCTGGAGAGGCCACAGATTCTTGAATTTCCTACTAGCTTGTATGGTATTTGCCTTTGTCATATCATGGCTTTTTCACTTCAATGTGCCCTCATGA 657 0.4825 MVVTEKSHVVVDIVVDNGGRRSSSVGGGGDGGHPDAADSVDKEQKSSHEASGAEIVGVSEKEQGSSASECSVEVDLENAVTETKVHLGEVMKRDCRICHLSMDMTNHESGSMELGCSCKDDLVAAHKQCAEAWFKIKGNKTCEICGSIARNVTGTFEVETVEQWNESTDASMAAPTGPAPSHGENRSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1200 218 ProSiteProfiles Zinc finger RING-CH-type profile. 87 152 IPR011016 GO:0008270
Lele26g1200 218 Pfam RING-variant domain 95 145 IPR011016 GO:0008270
Lele26g1200 218 SMART ringv_2 94 146 IPR011016 GO:0008270
Lele26g1200 218 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 154 IPR013083 -
Lele26g1200 218 MobiDBLite consensus disorder prediction 14 73 - -
Lele26g1200 218 SUPERFAMILY RING/U-box 90 148 - -
Lele26g1200 218 CDD RING_CH-C4HC3_MARCH 95 146 - -
Lele26g1200 218 PANTHER ZINC FINGER, RING-CH-TYPE 17 217 - -
Lele26g1200 218 MobiDBLite consensus disorder prediction 35 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1200 Lele-ChrLele26 7823921 7826024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1200 22 218 C3H Transcription Factor Family AT5G05830 56.566 5.78e-70 211