Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1197 ATGGTGAAGGGACGCCAAGGAGAGCGAGTCAGACTCTATGTTCGAGGTTCAATCCTTGGATACAAGAGGTCCAAGTCAAACCAATACCCAAATACATCACTTATCCAGGTTGAGGGAGTGAACTCCAAGGAAGAGGTTGCATGGTACAGTGGCAAGCGCATGGCATACATTTACAAGGCCAAGTGGTGTTGTCCGTGCCAAATTCAAGTCAAATCTGCCACCCAAATCAATGGGAGCAAGGGTAAGAGTCTTCATGTATCCAAGCAATATTTGAGGACACATCACGTAGTCTAA 294 0.4626 MVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQVEGVNSKEEVAWYSGKRMAYIYKAKWCCPCQIQVKSATQINGSKGKSLHVSKQYLRTHHVV 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1197 97 Gene3D translation elongation factor selb, chain A, domain 4 6 95 IPR038661 -
Lele26g1197 97 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 64 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lele26g1197 97 SUPERFAMILY Translation proteins 12 65 IPR009000 -
Lele26g1197 97 Pfam Ribosomal protein L35Ae 12 62 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1197 Lele-ChrLele26 7791724 7794018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1197 1 61 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 90.164 6.86e-36 116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1197 26 7791724 7794018 Lele27g0887 27 16871049 16872485 hybridization
Lele26g1197 26 7791724 7794018 Lele28g1189 28 7762402 7764038 hybridization