Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1191 ATGGCTATGGACGATCGAAACGTGAGAGGAATGAGCACCGGGTTAACCGATGTGGTCCTGGAACGTGTTATGGCTTTTATTCATGACCCCAAAGATCGGGATGCGGTTTCTCTAGTTTGCCGGCAGTGGTACGAGATGGACTGCTTGACCCGGAAGCACGTGACGATTGCTCTCTGCTACACGACCACCCCGGACCGACTCCGATGGAGATTTCCGCACCTCGAGTCGCTGAAGCTGAAAGGGAAACCGAGGGCGGCGATGTTCAATTTGATTCAGGATGATTGGGGAGGATATGTGGGGCCTTGGATTAAAGAGATTACAAAATATTTTGATTGTTTGAAGTCGCTTCATTTCCGTCGCATGATTGTGAGGGATTCCGATCTTGAGCTTCTTGCGCGGTCACGGGGACACGTGCTTCAAGCTCTTAAACTCGACAAGTGTTCTGGTTTCTCCACGGATGGCCTTTACCATATCGGCCGGTCTTGCAGGAATTTAAGAGTCTTGTTTTTGGAGGAGAGCCAAATTGTTGAGAATGATGGCGAATGGCTACATGAACTTGCTTTGAATAATACTGTTCTTGAGGCTCTAAATTTTTACGTGACAGATCTTATCAATATCAGAATTGAGGACCTTGAACTTATTGCAAAAAACTGTCACAACTTGGTTTCTGTGAAAATTACTGATATTGAGATCCTGAAGCTTGTAAACTTCTTTCGTTCTGCATCTGCACTAGAAGAGTTTTGTGGAGGCTCCTACAACGAGCAGCCGGAAAAGTACGCTGCTGTATCATTTCCCGCAAGGTTGTGCCGATTGGGTTTGACATATATTGGAAAGAATGAACTTCCAATAGTATTCCCTTTGGCATCCCTTCTAAAAAAGTTGGATCTCCTATATTCGATGTTGGATACAGAGGATCATTGTACAATAATCCAGAAGTGCCCCAACTTGGAAGTCCTTGAGTCAAGGAATGTAATTGGTGATAGAGGGCTCGAAGTTCTTGCACAAAGCTGTAAGAGGCTCAAGAGACTCAGGATTGAGCGAGGAGATGATGAGCAAGGAATGGAGGATGAAGAAGGTGTTGTTTCTCAGAGAGGGTTGATTGCTCTGTCACAGGGCTGTCCAGAACTTGAATATCTGGCTGTTTATGTATCTGACATCACAAATGCATCCCTGGAACATATTGGCAGCCACATGAAAAACCTCACCGATTTTCGTCTCGTCTTGCTAGACCGCGAGGCAACCATAACGGATTTACCTCTTGACAATGGGGTGAGAGCTTTATTAAGAGGTTGTGATAAGCTCAGAAGATTTGCTCTGTATCTTCGCTCCGGGGGCTTGACAGACGTTGGCCTCGCCTACATCGGGCAATACAGCCAAAACGTGAGATGGATGCTTCTGGGTTATGTAGGGGAATCTGATGAAGGGCTTCTGGAGTTTTCAAGGGGCTGCCCTAGCCTTCAAAAGCTTGAAATGAGAGGTTGTTCCTTCAGTGAGCATGCATTAGCCGTCGCCGCCACACGACTGACTTCTCTAAGGTATCTATGGGTGCAAGGGTATAGACAATCTGCATCTGGGCGTGATCTTTTTGCAATGGCAAGACCCTTCTGGAATATTGAGTTGATTCCTTCTAGGGGAGTTGTTGTTACTTATCAAAGTGGAGAATCTTTTGTGGTTGAGCATCCAGCACATATTCTTGCATATTACTCTCTTGCGGGACCAAGATCAGATTTTCCAGATTCTGTCGTTCCTTTGGATCCCACAGCATATGGTGAAAGTTAG 1779 0.4587 MAMDDRNVRGMSTGLTDVVLERVMAFIHDPKDRDAVSLVCRQWYEMDCLTRKHVTIALCYTTTPDRLRWRFPHLESLKLKGKPRAAMFNLIQDDWGGYVGPWIKEITKYFDCLKSLHFRRMIVRDSDLELLARSRGHVLQALKLDKCSGFSTDGLYHIGRSCRNLRVLFLEESQIVENDGEWLHELALNNTVLEALNFYVTDLINIRIEDLELIAKNCHNLVSVKITDIEILKLVNFFRSASALEEFCGGSYNEQPEKYAAVSFPARLCRLGLTYIGKNELPIVFPLASLLKKLDLLYSMLDTEDHCTIIQKCPNLEVLESRNVIGDRGLEVLAQSCKRLKRLRIERGDDEQGMEDEEGVVSQRGLIALSQGCPELEYLAVYVSDITNASLEHIGSHMKNLTDFRLVLLDREATITDLPLDNGVRALLRGCDKLRRFALYLRSGGLTDVGLAYIGQYSQNVRWMLLGYVGESDEGLLEFSRGCPSLQKLEMRGCSFSEHALAVAATRLTSLRYLWVQGYRQSASGRDLFAMARPFWNIELIPSRGVVVTYQSGESFVVEHPAHILAYYSLAGPRSDFPDSVVPLDPTAYGES 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1191 592 Pfam F-box 13 53 IPR041567 -
Lele26g1191 592 Gene3D - 3 51 - -
Lele26g1191 592 FunFam Coronatine-insensitive protein 1 52 587 - -
Lele26g1191 592 SMART LRR_CC_2 431 457 IPR006553 -
Lele26g1191 592 SMART LRR_CC_2 313 336 IPR006553 -
Lele26g1191 592 SMART LRR_CC_2 483 507 IPR006553 -
Lele26g1191 592 SMART LRR_CC_2 136 161 IPR006553 -
Lele26g1191 592 SMART LRR_CC_2 373 397 IPR006553 -
Lele26g1191 592 Gene3D Ribonuclease Inhibitor 52 588 IPR032675 -
Lele26g1191 592 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 15 247 - -
Lele26g1191 592 SUPERFAMILY RNI-like 87 527 - -
Lele26g1191 592 Pfam Transport inhibitor response 1 protein domain 72 118 IPR041101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1191 Lele-ChrLele26 7749338 7753330 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1192 26 7759642 7760603 Lele26g1191 26 7749338 7753330 CCT
Lele27g0892 27 16899624 16900574 Lele26g1191 26 7749338 7753330 CCT
Lele28g1184 28 7735073 7736031 Lele26g1191 26 7749338 7753330 CCT
Lele25g1185 25 7800085 7803831 Lele26g1191 26 7749338 7753330 CCT
Lele26g1191 26 7749338 7753330 Lele26g1191 26 7749338 7753330 ECH
Lele26g1191 26 7749338 7753330 Lele27g0893 27 16907557 16911150 hybridization
Lele26g1191 26 7749338 7753330 Lele28g1183 28 7724630 7728618 hybridization