Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1168 ATGGCTGGGAGGTTAAGAAACGAGGCAAGCAGTAGCAGCAACAGCAGAAGGGAAAGCGTCGTGGTCGATTGTGGAAGACGTCGAAGCTCTTGCGGTTATTGTAGATCCCCTGGTCGTACCAGCATCTCTCACGGCTTGTGGGCACAGAGCCTTACAGTGAATGATTACCAAGATCTTCTTGATCGGGGATGGCGAAGATCTGGATGTTTTCTTTACAAACCAGAGATGGAAAGGACTTGCTGTCCTTCTTATACAATTCGCATGAAAGCAAGTGACTTTGTTCCTTCTAAAGAGCAACTTCGTGTATCTAAACGGATGCAAAGGTTTCTAGATGGCACGTTGGATGTCAAAAAAGTTGATGTTTTGGAGCGCCCAACTACTTCTAATGAATCCAAAAGCTCTGTCCACCATGAGTCCTCAAGCTCCGTGTCAAAAGACTCCCCCTCTACTTGTAATGAAGAGAAAAATGAGATTGAGAAAGTTTTGCTCTACTTATCAGATCAAATTGATGATGCAGTTTGCATGTTCACTAATAAGGAAGAATTTCCCTCTGGTATTCAGTTACCAAAAGCGTCAGTCAAAACAGTTTCACCTGGGAAAAGGAAGTTACTAGTTAATGGATCAGAAGATCTCCTCTACAGTAGCAACATATCATTCCAAATTGCAGCTTCTATAAAGCGAGCACACCTAGGTGACAAAAATGCCCATCAGTCAAAATTGTCAGGAGATTGTACAGAAGAGAATGACTTGTCCCCTAAAGTTATTGGTGAAAAGTTGGCAACATCTTTAGCTCAAACTTTAAAGGGTTCCGATATATCTATAAGATCTTGCAATGGACACATCAATTTTTATTCCTCCACTAAGCAAGTTTCCTCAAGTGAAGGTGCTCAAAATGCTTCAACTCATAAAAGATCTGGGATAAAGCGTGGGAGTGAAGGAAACTTTTTGAATAACCCTCAATGTAGTCAAGTGAAAAGCCGAAGGCTTGAGCTTCGCTTGAAAAGATCAAGTTTTGATCCAGAAGAATATGCTTTGTATAGAAGATATCAGCTCATAGTACATAATGATAAACCTGACCATGTCACTGAGAGCTCATATAGAAGGTTTCTGGTTGATACTCCATTGTTATATGTTGCTTCCTTTGGGGATGGAACAGCTCCTCCTTGCGGTTTTGGCTCCTTCCATCAACAATATTTAATAGATGGCCGATTAGTGGCCGTTGGTGTTATAGATATCCTCCCAAAATGTTTATCTAGTAAATATTTGTTCTGGGATCCTGACTTTGCCTTCTTATCTCTGGGCAAGTATTCAGCACTCCAAGAAATAGGTTGGGTGAAAGAAAACCAAGTTCATTGTTCCAGCCTTCAGTATTATTATCTTGGCTACTATATTCACTCTTGCAGCAAGATGAGATACAAAGCTGCGTATCGCCCATCAGAGCTTCTATGTCCTCTTCGTTACCAGTGGATTCCATTCGATATTGCGAAGCCTTTGCTTGACAGAAAGCCATATGTTGTTTTATCAGATTCTTCCATTTTACAAAATGGAGAGTCATCATCCCAACCTCAAGTTACTGAAGATGTTTTGGAAAGGCATCTTGATGTTGACCAACAAGATGCAAATGATGTTCCCATGGATGAAGATGAAGAAATGGTTGAGTCTGAATTCGAAAGTTCTGATGATGAGCCCAGCCTAGAAACTACCTCATACGGTGAAACAGATGGGGATGTCAACAAAGTTTTGCTTGGGTTAAAGGGGTCTCGTTTGAGATACAATGATCTGCGAGGTGCCTTTGGTCCAGAGGAGCGGAGTTACTTGGAATCTCAGTTGCAGAGATACAAGAGGGTTGTGGGGCCAGAGTTATGTGAGCGAATGGTTTATTCACTGGGATGA 1893 0.4163 MAGRLRNEASSSSNSRRESVVVDCGRRRSSCGYCRSPGRTSISHGLWAQSLTVNDYQDLLDRGWRRSGCFLYKPEMERTCCPSYTIRMKASDFVPSKEQLRVSKRMQRFLDGTLDVKKVDVLERPTTSNESKSSVHHESSSSVSKDSPSTCNEEKNEIEKVLLYLSDQIDDAVCMFTNKEEFPSGIQLPKASVKTVSPGKRKLLVNGSEDLLYSSNISFQIAASIKRAHLGDKNAHQSKLSGDCTEENDLSPKVIGEKLATSLAQTLKGSDISIRSCNGHINFYSSTKQVSSSEGAQNASTHKRSGIKRGSEGNFLNNPQCSQVKSRRLELRLKRSSFDPEEYALYRRYQLIVHNDKPDHVTESSYRRFLVDTPLLYVASFGDGTAPPCGFGSFHQQYLIDGRLVAVGVIDILPKCLSSKYLFWDPDFAFLSLGKYSALQEIGWVKENQVHCSSLQYYYLGYYIHSCSKMRYKAAYRPSELLCPLRYQWIPFDIAKPLLDRKPYVVLSDSSILQNGESSSQPQVTEDVLERHLDVDQQDANDVPMDEDEEMVESEFESSDDEPSLETTSYGETDGDVNKVLLGLKGSRLRYNDLRGAFGPEERSYLESQLQRYKRVVGPELCERMVYSLG 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1168 630 MobiDBLite consensus disorder prediction 540 562 - -
Lele26g1168 630 PANTHER ARGININE-TRNA-PROTEIN TRANSFERASE 1 14 628 IPR030700 -
Lele26g1168 630 Pfam Arginine-tRNA-protein transferase, C terminus 341 483 IPR007472 GO:0004057|GO:0016598
Lele26g1168 630 MobiDBLite consensus disorder prediction 121 151 - -
Lele26g1168 630 MobiDBLite consensus disorder prediction 126 149 - -
Lele26g1168 630 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 326 493 IPR016181 -
Lele26g1168 630 MobiDBLite consensus disorder prediction 292 318 - -
Lele26g1168 630 MobiDBLite consensus disorder prediction 535 573 - -
Lele26g1168 630 PIRSF ATE1_euk 9 630 IPR017137 GO:0004057|GO:0016598
Lele26g1168 630 Pfam Arginine-tRNA-protein transferase, N terminus 29 99 IPR007471 GO:0004057|GO:0016598
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1168 Lele-ChrLele26 7592121 7596988 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1168 26 7592121 7596988 Lele25g1168 25 7616395 7620438 CCT
Lele26g1168 26 7592121 7596988 Lele26g1167 26 7586489 7590360 CCT
Lele26g1168 26 7592121 7596988 Lele27g0911 27 17064114 17068142 CCT
Lele26g1168 26 7592121 7596988 Lele28g1159 28 7563425 7567281 CCT
Lele26g1168 26 7592121 7596988 Lele26g1168 26 7592121 7596988 ECH
Lele26g1168 26 7592121 7596988 Lele27g0910 27 17058916 17062744 hybridization
Lele26g1168 26 7592121 7596988 Lele28g1161 28 7575684 7578720 hybridization