Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1166 ATGGCTACCGCCACGTCTGCGGCCACCTCATACTTCTTCGGCCCGCGGCTAGCCACCAACAATCCCGCCTCTGACTCGGGCAGATTCCACGCCCTGCTTAAGTTCGGTACCAAGAAGAAGGCCGCCCCGCCTCCTCCGCCCCCCAAGAAAGCGCCGTCCAACACCAAACCATCTGGAGACCGGCTCGTGTGGATCCCCGGTGCCCAACCACCGGAATGGCTCGACGGAACCATGGTAGGAGACCGTGGGTTCGATCCATTTGGGTTGGGGAAACCCGCCGAGTATTTGCAGTTCGACTTGGACTCGCTGGATCAGAATCTGGCTAAGAATGTGGCCGGAGAAATAATCGGAACCAGAGTGGAGATCACGGAGGTTAAACCAACGCCGTTCCAGCCGTACACGGAGGTGTTCGGATTGCAGAGGTTCCGCGAGTGTGAGCTGATTCATGGAAGGTGGGCAATGCTGGGAACACTCGGTGCCTTGGCCGTTGAAGCATTTACTGGAGTTGCATGGCAAGACGCTGGAAAGGTGGAGCTGGTGGAAGGATCATCCTATCTGGGGCTTCCTCTTCCCTTCTCATTGACCACACTGATCTGGATCGAGGTGATATTGATAGGCTACATTGAATTCCAAAGAAACGCAGAACTTGACCCAGAAAAGAGGATATACCCAGGTGGCAAGTTCTTTGATCCCCTCGGCTTGGCCAACGACCCCGAAGAGAGGGCCAGACTTCAACTTGCAGAGATCAAGCACTCCAGGTTAGCCATGGTGGTTTTCCTCATCTTTGCAATTCAAGCTGCTGTTACAGGCAAAGGTCCCATCGCTTTTATTGCTACCTTTAACAAGTGA 849 0.5453 MATATSAATSYFFGPRLATNNPASDSGRFHALLKFGTKKKAAPPPPPPKKAPSNTKPSGDRLVWIPGAQPPEWLDGTMVGDRGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGEIIGTRVEITEVKPTPFQPYTEVFGLQRFRECELIHGRWAMLGTLGALAVEAFTGVAWQDAGKVELVEGSSYLGLPLPFSLTTLIWIEVILIGYIEFQRNAELDPEKRIYPGGKFFDPLGLANDPEERARLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPIAFIATFNK 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1166 282 Pfam Chlorophyll A-B binding protein 70 266 IPR022796 -
Lele26g1166 282 Gene3D Chlorophyll a/b binding protein domain 63 282 - -
Lele26g1166 282 MobiDBLite consensus disorder prediction 1 25 - -
Lele26g1166 282 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 34 278 IPR001344 GO:0009765|GO:0016020
Lele26g1166 282 SUPERFAMILY Chlorophyll a-b binding protein 58 279 - -
Lele26g1166 282 MobiDBLite consensus disorder prediction 38 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1166 Lele-ChrLele26 7584313 7586357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1166 19 279 Chloroplast and Mitochondria Gene Families AT3G08940 71.648 7.26e-134 379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1166 26 7584313 7586357 Lele26g1166 26 7584313 7586357 ECH
Lele26g1166 26 7584313 7586357 Lele27g0912 27 17068277 17070594 hybridization
Lele26g1166 26 7584313 7586357 Lele28g1158 28 7561289 7563301 hybridization