Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1164 ATGAGGATTACGTTGGACACAGAGGAGACGAACTCGGAGCCTAGGCGCTCAACAACGCCCAAAGAAGAAGTTGAATGGGTTCCACTTGAGAAACACCCGGTCTTCGTCGCCACCAATAACTCCATAGACGGCGATTACAGCGTTGCATTTTCCAGAAATCTCGTGGCCTGGGACGGATCCTCTCGTCTCTATTTCTGGGAACCTAAGACCAACTGCCTCCATCGTCTGTCTCTTCGGCTCGGCGAGCCTGAGCCTACTTCTGTACTTGTTGCTTCTCCTTCTAAGGTATTGCGAGCAGATGTGGAGATCAACTTTGCTATCCACAAAATCTTTATCAACAGAAATGGATCGGCATTACTTCTTTTTGGTTCTGAAAGACTGTGTGTTATGTATCTGTATGGACGTACATCCAGAAAGGATGTAAATTTGATTTGCAGGACTATTATGATCGGTTCACAAACATATTCCAAGAGTAGCAATGATATACGCTTGCTAAAAGCTTTATGGCATCCGTATAGTGATTGTCATGTGGGAATCCTTTCTTCTGACTCAGTTTTCAGGCTTTTTAATTTGGCCTTGGATCCTTTGCAACCTGAGCAAGAATATTATTTGCAGCCTGTGGATCCAGGCAGATCCAGAAATGCTTCATCAATGCGCCCAGTTGATTTTTCTTTTGGTGGTGACCACTTATGGGACAGGTTTAGCGTATTTATTTTGTTTGGTGATGGAGCTATTTACATCCTTTGCCCAGTTGTTCCATTTGGAAGTCTCTTCAAATCGGAATCTGTGCTAGAAATATACAATGATGCTCATACGTTTGGGCTCAAATCTGCAAACTCTAAAGCCCTTAGTAATTCAAAATTGGCAATCTCATGGTTGGAAGCAACATTCCCCGAGTTACAAAATCAAGAGACAGAAGAAAACATGTCTGTGCTAAGGGCTCATGCTTATGTTCAATTTGATGCATCTCTTACCCTGCAGGGACCTCTTCGAAGAGTAGGTCAGGGCGGGAAAGAAGATTCAGTTGGTCGTAGTGCAGAATGTGAAGGCCGTGCAGTTAGTTTTCTTTATGATCTTGTAAGCAAAGACACAATATTGGTAACTTCTTGGAGTGGCGGGCAATTACAGATAGATGCTCTGGCTGATGAGATCCAGCCTGTGTGGAGTGCTGGTAGTCCTCCACGTGTTCGTGTTGATTCTGACAACCATATTCTTGGCCTTGCCATGATTTGTGAGTCAATAACCAGTGACCTACAAGAGAAGCTTGATCATACGGTCTGGTTGGGCAATCCACCACCACTGCTGAGACTGGCTATTGTTGACTTGGCTCTGCCTCGGAGAGTGGAAAGTGGTTATAATATTGCATTGTTTGTGGATCCTCTTATGCCAGAAAGAATATATTCCCTTCATGATGGAGGGATTGATTCAATAGTGTTGCATTTCCTTCCATTCACAAGCCAGGCAAATGGCAAGGATGATGCAATGAGAACTCCTTCTGTGCATCCTGTTCTAAATACATGTCAGAGTGGGAGCACCACAGCATCTCCTCTCTGTGGTTTTGCATCTTTGTCAGATTCCTTCGGATATTCATGGATTGTGGCAGTCACTCTTTCTCAAGAGTGCATTGTGCTAGAGACAAAAACGTGGAACCTGTTGCTGCCACCAAATGTTGATATGGAGAAAATTCAATTAGAGGATGAATCAGAAAAGAGAGACATACCAACTATCATTAGCAAAGAATTACTTAGTGGGCCTAGGACGGTACTTGTTCCTCAAGCGTCTCCAAGCTTACGTTATATTTCACCTGATTCAATTGAAGGCAGAGCAGCATTGCATCAGTATTTCAAGCTTTTTCATGAAACGTATGTGGAGTATGCACATAAGGTGTACTTGGAACTCAAGCATCATGCTCCTCAGTTGAAGAAAATCGTTGATGACCAACATGCTCGCTTGGGTGATGCACAGCAGAAGCTTTTGAAAGTTGCGGAGAAGCAGCCACTATTAGTGAAAAGAATAGATCGTGCAGTTCAAATGCATAGTTCTTTGGAAGAGCGCTTGCAACAATTAAGGAACTTACCTGGTGCTCACAAAAAGCCATTATCTAAAGCTGAGCGACAATTCAAGTCTGAGCTTGACCACTTCAGGGAAGTTGAGTTGGATGCTTTGCATTCTTCTGTTGATGCTCTAAGTGCTAGGCTGAGGAGGTACATGCAAGCAACCAAAGCTCATAGCCCCCAAAGGCAAATAATAGGTAGGAAGAGTTATGTTGACAAGGCCCAGATATCGATGCTCAAATCTTCACTCGAAAAAATTTCACTCTTGAATAGTGAGAACTCGAAAAAGGTTAAGCTTGTTGAGTCTGCATTGAGAACACAGGAAAAAGGCGGCAGGGAATCAAGCCTTCCTCCTAAACCTTGA 2418 0.4351 MRITLDTEETNSEPRRSTTPKEEVEWVPLEKHPVFVATNNSIDGDYSVAFSRNLVAWDGSSRLYFWEPKTNCLHRLSLRLGEPEPTSVLVASPSKVLRADVEINFAIHKIFINRNGSALLLFGSERLCVMYLYGRTSRKDVNLICRTIMIGSQTYSKSSNDIRLLKALWHPYSDCHVGILSSDSVFRLFNLALDPLQPEQEYYLQPVDPGRSRNASSMRPVDFSFGGDHLWDRFSVFILFGDGAIYILCPVVPFGSLFKSESVLEIYNDAHTFGLKSANSKALSNSKLAISWLEATFPELQNQETEENMSVLRAHAYVQFDASLTLQGPLRRVGQGGKEDSVGRSAECEGRAVSFLYDLVSKDTILVTSWSGGQLQIDALADEIQPVWSAGSPPRVRVDSDNHILGLAMICESITSDLQEKLDHTVWLGNPPPLLRLAIVDLALPRRVESGYNIALFVDPLMPERIYSLHDGGIDSIVLHFLPFTSQANGKDDAMRTPSVHPVLNTCQSGSTTASPLCGFASLSDSFGYSWIVAVTLSQECIVLETKTWNLLLPPNVDMEKIQLEDESEKRDIPTIISKELLSGPRTVLVPQASPSLRYISPDSIEGRAALHQYFKLFHETYVEYAHKVYLELKHHAPQLKKIVDDQHARLGDAQQKLLKVAEKQPLLVKRIDRAVQMHSSLEERLQQLRNLPGAHKKPLSKAERQFKSELDHFREVELDALHSSVDALSARLRRYMQATKAHSPQRQIIGRKSYVDKAQISMLKSSLEKISLLNSENSKKVKLVESALRTQEKGGRESSLPPKP 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1164 805 MobiDBLite consensus disorder prediction 1 21 - -
Lele26g1164 805 PANTHER NUCLEOPORIN NUP84-RELATED 16 794 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
Lele26g1164 805 Coils Coil 672 692 - -
Lele26g1164 805 Pfam Nuclear pore component 453 771 IPR019321 -
Lele26g1164 805 Pfam Nuclear pore component 29 226 IPR019321 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1164 Lele-ChrLele26 7554550 7560622 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1164 26 7554550 7560622 Lele25g1164 25 7577944 7579902 CCT
Lele26g1164 26 7554550 7560622 Lele26g1163 26 7550633 7553020 CCT
Lele26g1164 26 7554550 7560622 Lele27g0915 27 17100284 17102303 CCT
Lele26g1164 26 7554550 7560622 Lele28g1155 28 7527764 7528328 CCT
Lele26g1164 26 7554550 7560622 Lele26g1164 26 7554550 7560622 ECH
Lele26g1164 26 7554550 7560622 Lele27g0914 27 17091660 17097479 hybridization
Lele26g1164 26 7554550 7560622 Lele28g1156 28 7532033 7538068 hybridization