Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1158 ATGGCGATTAAAGCCAATAGAACGGTGGTTTCGGCTTGTCTTTTCTGGGTTTTCATTCTGTGCGCGACAATAGCATTATTTCAGCTTAAACTGATAGAGAACGGGAGAGACCATTCGTCTCCCTCCAAGGCCATCGAAACTGCGCATCGTTCGGTGAGAATCAATGATAATCTGTTCTCTACTTGTCTTCATTTTGTTCTTTCATTTCAGGATCTCACCTTACCCTCTTCCTCCCTCCCTCTCCGATCGAATGTTCTGCAGGAAAACCCAGCGGAAGAGGATTTGGAGGGAGTCACCCACAAAGTGTTTTTTGATATAGAGATCGATGGGAAACTTGCGGGTCGCGTAGTCATGGGACTTTTTGGAGCAGTGGTTCCAAAAACTGTAGAAAACTTTCGAGCACTTTGTACTGGGGAGAAAGGAGTGGGAAAAAGTGGGAAGCCTCTTCATTACAAAGGAAGCACATTCCATAGGATAATACCCAGCTTTATGGTCCAAGGGGGTGATTTCACCCATGGTGATGGACAAGGGGGAGAATCAATCTATGGTTCTAAGTTTGCTGATGAAAACTTCAAAGTGAAGCATAATGGACCAGGATACTTGTCAATGGCGAATGCGGGAACGGACACAAATGGCTCCCAATTTTTTATAACAACGGTTAAAACTAGCTGGTTGGACGGCCGGCATGTTGTGTTTGGGAAGGTGCTTTCGGGGATGGATATTGTGTACAAGATCGAAGCACAAGGAAGAGCTAATGGTGAGCCCAAAGGCAAGGTTCTTATACTTGACAGTGGCGAATTAACTTCATGA 810 0.4519 MAIKANRTVVSACLFWVFILCATIALFQLKLIENGRDHSSPSKAIETAHRSVRINDNLFSTCLHFVLSFQDLTLPSSSLPLRSNVLQENPAEEDLEGVTHKVFFDIEIDGKLAGRVVMGLFGAVVPKTVENFRALCTGEKGVGKSGKPLHYKGSTFHRIIPSFMVQGGDFTHGDGQGGESIYGSKFADENFKVKHNGPGYLSMANAGTDTNGSQFFITTVKTSWLDGRHVVFGKVLSGMDIVYKIEAQGRANGEPKGKVLILDSGELTS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1158 269 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 103 266 IPR002130 GO:0000413|GO:0003755
Lele26g1158 269 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 101 267 - -
Lele26g1158 269 FunFam Peptidyl-prolyl cis-trans isomerase 96 268 - -
Lele26g1158 269 SUPERFAMILY Cyclophilin-like 98 267 IPR029000 -
Lele26g1158 269 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 104 263 IPR002130 GO:0000413|GO:0003755
Lele26g1158 269 Gene3D - 89 269 IPR029000 -
Lele26g1158 269 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 151 168 IPR020892 GO:0003755|GO:0006457
Lele26g1158 269 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 227 242 IPR002130 GO:0000413|GO:0003755
Lele26g1158 269 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 214 226 IPR002130 GO:0000413|GO:0003755
Lele26g1158 269 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 135 IPR002130 GO:0000413|GO:0003755
Lele26g1158 269 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 156 168 IPR002130 GO:0000413|GO:0003755
Lele26g1158 269 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 199 214 IPR002130 GO:0000413|GO:0003755
Lele26g1158 269 CDD cyclophilin_ABH_like 100 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1158 Lele-ChrLele26 7510919 7513554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1158 114 246 U-box Gene Family AT5G67530 44.030 6.31e-25 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1158 26 7510919 7513554 Lele25g1159 25 7521680 7524962 CCT
Lele26g1158 26 7510919 7513554 Lele27g0921 27 17141992 17145253 CCT
Lele25g1160 25 7533362 7535139 Lele26g1158 26 7510919 7513554 ECH
Lele26g1158 26 7510919 7513554 Lele26g1158 26 7510919 7513554 ECH
Lele26g1158 26 7510919 7513554 Lele27g0920 27 17133338 17136688 hybridization
Lele26g1158 26 7510919 7513554 Lele28g1151 28 7487404 7493158 hybridization