Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1157 ATGTCACTCACTACTAACAACGATTCTCCTTTGAAGAAAAACCAGGAGGAAGAGGAAGAGGAAGAAGAAGAGGGGATTGTTGAAAGCATGAAGACCTATAACAAGTACAAGTGGCTCTTGTTCTTCACCAGAAAGTACAACAGCAACGATCTGGTTCCACCTCGTGACCTCAAGGAGGCCTTCTCCAACTTCGCCGGCGGCCGGAATCTCATGTCCGTCGACCAGTTCCTGCGGTTCCTGGTGGAGCACCAGGGCCACGTGGACTGCACCGTATCGGAATCGGAGGAAATCGTCGACAAGATCCTGAAAGCTCGAAAGGGAAGTCACGACGATGATCCACGAATTGAACAACAACAACAACATGGACTCACTCTCGAACACATCTTCCATTTTCTTCTTCTCGAAGATTTCAGCAGTCCTCTGAAATCTAAGGTTCATCATGATATGGAAGCCCCGTTATCACACTATTTCATATACACAGGGCATAATTCATATCTTACTGGGAATCAATTGAGCAGTGATTGCAGTGAAGAACCGATCATTAAGGCTCTACAACGCGGCGTGAGGGTCATCGAACTAGATTTATGGCCTACGTCCAACAAAGATGATATTAAAGTAGTTCATGGATGGACTTTTACCAATCCTGTTTCGCCTCATAAATGTTTGGAGGCTATAAAGAAATATGCTTTTGTGAAATCTGAGTACCCAGTTATTATAACTATTGAAGACCATCTTACAAGAGATCTTCAAGCTAAATTTGCAGAGATGGCTACTCAAATACTAGGAGAGTTGCTATATTATCCTCAGGGGAAACGTTTGACAGAATTCCCATCACCAAAATCATTGAAAAACAAAATAATTATATCCACCAAACCTCCAAAAGAACATCTTTGTAAATTTATTGAAGATAAAGGTAACAACGATGTGCAAGATGGAAGTGAATCATCTGAAGAAGAAACATCATGGGGACAAGAATCGCCAGACTCCATGGCTGAACCAGAGACAACTGAGAACAAAGTGGCTGAACCACAAACTGAGAACAAGATGAGTCAGAATGGAAGTGAGAAAGAAGAGGGAGATTCAAATGGAGGTGATGAACAACATGGGACAGATCAAAAGTGTTCAGCTGATTATAAACTCTTGATTACAATCCATGCGAAGAAACTCAAGGGAAGCCTGAAGGATAAATTGAGGATTGAAGAAGAAGTTAGACGCCTAAGTTGGAATGAGCAAACACTTGAAAAGGCTTGTGAATCTCATGGAACTGATATTATAAGGTTCACACAGAGAAACATCCTCAGGGTATACCCAAAAGGAACACGTGTCCAATCCTCAAATTTCAAGCCACATAAAGGGTGGATGTATGGGGCTCAAATGGTGGCATTCAATATGCAGAAGCATGGGAAAGAGCTATGGTTGATGCAGGGAATGTTCAGGGCAAATGGGGGGTGTGGTTATGTGAAAAAACCAGAAATAGTAATGCAGAATCTTCCAAATGGTGAACTGTTTGATCCTAAAAGAACATTGCCACTGAAAACGACATTAAAGGTAAATGTGTACATGGGACATGGCTGGAGCTCAGATTTCAGTCCCACCCACTTTGACAAGTTCTCTCCGCCAGACTTCTACACAAAGGTATGTATTGTTGGAGTGCCAGCTGACTGTGCCAGGAAGAGCACAAGGGTAATAATGGACAATTGGTTTCCTGTTTGGGACGAGGAATTCCAATTCCCTTTAACGGTCCCAGAGTTGGCATTGCTTGGGATAATAGTGAGGGAGAAAGACCAGGGAAAGGATGACTTTGGAGGGCAGACATGTTTGCCAATCTCAGAGCTAAGACTTGGATTTCGTTCAGTCCCTTTGTATAACAGAAAGGGAGAGAAATACAAATCTGTAAAGCTTTTCATGCGGTTTCAGTTCATTGACCAAGAAGAAAATGCAGTTTCAGTCAAATGA 1956 0.4248 MSLTTNNDSPLKKNQEEEEEEEEEGIVESMKTYNKYKWLLFFTRKYNSNDLVPPRDLKEAFSNFAGGRNLMSVDQFLRFLVEHQGHVDCTVSESEEIVDKILKARKGSHDDDPRIEQQQQHGLTLEHIFHFLLLEDFSSPLKSKVHHDMEAPLSHYFIYTGHNSYLTGNQLSSDCSEEPIIKALQRGVRVIELDLWPTSNKDDIKVVHGWTFTNPVSPHKCLEAIKKYAFVKSEYPVIITIEDHLTRDLQAKFAEMATQILGELLYYPQGKRLTEFPSPKSLKNKIIISTKPPKEHLCKFIEDKGNNDVQDGSESSEEETSWGQESPDSMAEPETTENKVAEPQTENKMSQNGSEKEEGDSNGGDEQHGTDQKCSADYKLLITIHAKKLKGSLKDKLRIEEEVRRLSWNEQTLEKACESHGTDIIRFTQRNILRVYPKGTRVQSSNFKPHKGWMYGAQMVAFNMQKHGKELWLMQGMFRANGGCGYVKKPEIVMQNLPNGELFDPKRTLPLKTTLKVNVYMGHGWSSDFSPTHFDKFSPPDFYTKVCIVGVPADCARKSTRVIMDNWFPVWDEEFQFPLTVPELALLGIIVREKDQGKDDFGGQTCLPISELRLGFRSVPLYNRKGEKYKSVKLFMRFQFIDQEENAVSVK 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1157 651 SMART plcy_3 378 494 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele26g1157 651 Gene3D Phosphatidylinositol (PI) phosphodiesterase 144 505 IPR017946 GO:0006629|GO:0008081
Lele26g1157 651 Pfam Phosphatidylinositol-specific phospholipase C, X domain 149 291 IPR000909 -
Lele26g1157 651 Gene3D C2 domain 510 650 IPR035892 -
Lele26g1157 651 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 407 493 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele26g1157 651 SUPERFAMILY PLC-like phosphodiesterases 147 495 IPR017946 GO:0006629|GO:0008081
Lele26g1157 651 Gene3D - 49 140 - -
Lele26g1157 651 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 383 491 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele26g1157 651 FunFam Phosphoinositide phospholipase C 509 641 - -
Lele26g1157 651 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 40 640 IPR001192 GO:0035556
Lele26g1157 651 CDD C2_PLC_like 512 640 - -
Lele26g1157 651 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 147 291 - -
Lele26g1157 651 MobiDBLite consensus disorder prediction 304 371 - -
Lele26g1157 651 SMART C2_3c 514 621 IPR000008 -
Lele26g1157 651 Pfam C2 domain 514 613 IPR000008 -
Lele26g1157 651 SUPERFAMILY EF-hand 53 133 IPR011992 -
Lele26g1157 651 SMART plcx_3 147 291 IPR000909 -
Lele26g1157 651 MobiDBLite consensus disorder prediction 316 350 - -
Lele26g1157 651 ProSiteProfiles C2 domain profile. 498 623 IPR000008 -
Lele26g1157 651 PRINTS Phospholipase C signature 432 453 IPR001192 GO:0035556
Lele26g1157 651 PRINTS Phospholipase C signature 453 471 IPR001192 GO:0035556
Lele26g1157 651 PRINTS Phospholipase C signature 152 170 IPR001192 GO:0035556
Lele26g1157 651 PRINTS Phospholipase C signature 178 198 IPR001192 GO:0035556
Lele26g1157 651 PRINTS Phospholipase C signature 607 617 IPR001192 GO:0035556
Lele26g1157 651 PRINTS Phospholipase C signature 275 292 IPR001192 GO:0035556
Lele26g1157 651 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 514 641 IPR035892 -
Lele26g1157 651 MobiDBLite consensus disorder prediction 1 26 - -
Lele26g1157 651 MobiDBLite consensus disorder prediction 351 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1157 Lele-ChrLele26 7490783 7494089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1157 19 640 Acyl Lipid Metabolism Gene Families AT2G40116 53.655 0.0 669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0921 27 17141992 17145253 Lele26g1157 26 7490783 7494089 CCT
Lele25g1158 25 7504698 7516712 Lele26g1157 26 7490783 7494089 CCT
Lele26g1157 26 7490783 7494089 Lele27g0923 27 17162913 17167247 CCT
Lele26g1157 26 7490783 7494089 Lele25g1174 25 7663490 7666752 CCT
Lele26g1157 26 7490783 7494089 Lele26g1175 26 7632645 7636402 CCT
Lele26g1157 26 7490783 7494089 Lele27g0906 27 17017612 17020825 CCT
Lele26g1157 26 7490783 7494089 Lele28g1168 28 7618012 7621760 CCT
Lele25g1158 25 7504698 7516712 Lele26g1157 26 7490783 7494089 ECH
Lele26g1157 26 7490783 7494089 Lele26g1157 26 7490783 7494089 ECH
Lele26g1157 26 7490783 7494089 Lele27g0922 27 17148637 17153282 hybridization
Lele26g1157 26 7490783 7494089 Lele28g1150 28 7482135 7485334 hybridization