Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1156 ATGACGAATTCACTCTTCTTCTCCGTCAACGTCTGCCTCATCGCCGCCGTAACCCTCTTCTCTGCAATCCCCTTCATCCATTCTCTGGGTTCCGGCGCTACTCTTGCCGTAATCGATGACTCCGGCACCGTCTGTGGCATCGTGGCAGGGGAACGGACTCAGCGCATTGAATGCTACCGTCGCGGGCAGATCCTTACCGTTACTCCTAACGTTTCGTTTTCGTCGATTTCCGGCGGGAGGAGCTACTTCTGCGGCCTTAGGTCCGGTAACTACAGTTTGCTCTGCTGGGACGCTGTTTCTTCCAATTCCAGCGGTTCCTTCCAAGGGAAGAGGCTTTACTCTAATTTTACTGTTCTGTTGGAGAACCTGGCGGTTGGGTATACCCAAGTCTGCGCGACCGTCGTGGGTTCAGGCACCGTTCGGTGCTGGAGAACCAATGACATACCTCCGCCGGATCAATTTGCGACGATAACATCTGGGTCTGGCTTTTCTTGCGGGATCTTGAAGAATACTTCTCGGGTTCATTGTTGGGGAATGCAACCCCTTTCGGGTCAAATACTGAACGGATTCGGAGACATGCCCATGTTGAGTCTTGTCGCCGGCGATTCACATGTTTGTGGATTGAATTCAACAGGGTTTGTGGTATGCGGAGGAAGTAACAGTTCTGGGCAGCTTAGTGTTCCCCAACAAGGTGGACCTCTGGAATATTCTGGGTTGGCTCTCGGAGCTGAACATAGCTGCGCGATCAAACAGTCGAATCGTTTGGTTGTTTGCTGGGGAGGCGGTGGAGGGAGATTCTCGGCGAATGTTACAGAACGAACATCTTTCGAGTTAATTGTTTCTGGTTCAAATGTTACTTGCGGATTAGTCTCCGGGAATTTTTCTGTAATGTGCTGGGGACCTGGTTGGGCTAATAGTTCTGGCGAGCTTCCTTTACCTCCGATTCTCCCAGGGCCCTGTGTTCAATCTTCTTGAGGTGCAGCAACTTCTAGCAATAGCCCGCCATCGAGATCATCCACCATCAGACGACAGGGCTCGAGGATAATGAGGCGCCAGAGGAGCGGAACATCATCTACAAAACATCCTGATAGGGCAGATGAATTCACTCTAGCCGAGCTTGTGGCAGCCACTAATAATTTTTCCCTTGAAAACAAGGTTGGTGCTGGTAGTTTTGGTGTTGTGTACAGAGGCAAACTCGCTGATGGTCGTGAGGTGGCGATCAAGAGGGGTGAGATTGGTTCCAAGATGAAGAAATTTCAAGAGAAAGAGAGTGCATTTGAATCAGAACTCGCATTCTTGTCCCGGTTACATCACAAACACTTGGTCAGGCTAGTTGGTTTCTGTGAGGAAAAAGATGAGAGGCTCTTGGTGTATGAATACATGAAGAATGGAGCATTGCATGATCATTTGCATGCCAAGAACAATGTGGAAAAGAGTACTAGTTTCTTGAATTCGTGGAAAATGAGGATCAAGATCGCGCTTGATGCTTCTCGGGGGATCGAATATCTCCACAACTATGCAGATGGTGAAAATGGTGGCACCCCAGTGAGTTTGGTGGACTTTGCAGTGCCTGCAATAATGGCCAACGAATTGCCCCGGATTCTGGACGCGAGGGTTGGGCCACCGGAGATGAACGAGGCGGAGGCGGTGGAGCTAGTGGCGTATATTGCAATGCACTGCGTGCATTTGGAAGGGAAGGACAGACCAACAATGACTGACATTGTGGCCAATCTGGAGAGAGCTTTGTCTCTTTGTGATAGTAGTCATGGCAGCATCTCAAGTGGCACAATCTCTATTGTTTCAGAATGA 1809 0.4981 MTNSLFFSVNVCLIAAVTLFSAIPFIHSLGSGATLAVIDDSGTVCGIVAGERTQRIECYRRGQILTVTPNVSFSSISGGRSYFCGLRSGNYSLLCWDAVSSNSSGSFQGKRLYSNFTVLLENLAVGYTQVCATVVGSGTVRCWRTNDIPPPDQFATITSGSGFSCGILKNTSRVHCWGMQPLSGQILNGFGDMPMLSLVAGDSHVCGLNSTGFVVCGGSNSSGQLSVPQQGGPLEYSGLALGAEHSCAIKQSNRLVVCWGGGGGRFSANVTERTSFELIVSGSNVTCGLVSGNFSVMCWGPGWANSSGELPLPPILPGPCVQSSXGAATSSNSPPSRSSTIRRQGSRIMRRQRSGTSSTKHPDRADEFTLAELVAATNNFSLENKVGAGSFGVVYRGKLADGREVAIKRGEIGSKMKKFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALHDHLHAKNNVEKSTSFLNSWKMRIKIALDASRGIEYLHNYADGENGGTPVSLVDFAVPAIMANELPRILDARVGPPEMNEAEAVELVAYIAMHCVHLEGKDRPTMTDIVANLERALSLCDSSHGSISSGTISIVSE 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1156 602 FunFam serine/threonine-protein kinase-like protein CCR1 349 460 - -
Lele26g1156 602 Gene3D - 21 185 IPR009091 -
Lele26g1156 602 MobiDBLite consensus disorder prediction 321 363 - -
Lele26g1156 602 SUPERFAMILY RCC1/BLIP-II 28 262 IPR009091 -
Lele26g1156 602 MobiDBLite consensus disorder prediction 323 343 - -
Lele26g1156 602 Pfam Protein tyrosine and serine/threonine kinase 381 505 IPR001245 GO:0004672|GO:0006468
Lele26g1156 602 Gene3D Transferase(Phosphotransferase) domain 1 366 519 - -
Lele26g1156 602 Gene3D - 186 348 IPR009091 -
Lele26g1156 602 SUPERFAMILY Protein kinase-like (PK-like) 358 507 IPR011009 -
Lele26g1156 602 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 510 588 IPR044815 GO:0004674
Lele26g1156 602 ProSiteProfiles Protein kinase domain profile. 380 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1156 602 ProSitePatterns Protein kinases ATP-binding region signature. 386 408 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1156 Lele-ChrLele26 7484351 7486741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1156 510 602 Receptor kinase-like Gene Family AT3G55950 69.892 3.46e-33 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lele26g1156 PK_Tyr_Ser-Thr 5.4e-20 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1157 25 7499948 7502353 Lele26g1156 26 7484351 7486741 CCT
Lele25g1147 25 7390741 7402155 Lele26g1156 26 7484351 7486741 CCT
Lele26g1156 26 7484351 7486741 Lele27g0924 27 17169492 17171897 hybridization
Lele26g1156 26 7484351 7486741 Lele28g1149 28 7475881 7478271 hybridization