Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1154 ATGGCCGTCTCCGATGTCGACGCCGTCATCGAGTTCCTTAGGAAGAATGGATTATCCGACGCTGAGTCTGCCCTCAAACAGGACATCATCGAGAAACGTGATCTGGGATCCTTTGACTACGAGAAATTCTTCTTCCCCATGGTGCCTCCGCCGCCGCCGGTCAGGGTCCGATCGTCATCCCGGCCGTCCCCCACTGACTGCTCCTCCGAAGATGAGTTCGTGAGCTTGAGTTCTTCTACTTCTAATGTTTGTTCTTCTGAATTCGTCAATCCGTATGGACTCCGTTCTTCGTCTCAGAATGATTCTGAATCTTCATCTGATAGACAATCTCAATTCGGAACGGCACGAGATCACCCTGAGTTCGATATACAAAACGAAAACGAATCATATTGGTACAACGAGGAAGATGATGACAATTTCATGAGTCCAAACTTTGAAGGGCCAGATTTTTTTAGCTCTCCAACTGAGGACAAGTTCATAACAACATCAGAAATGGACAATGATCAGTACGAGAATCCTCTGAATCTTAGTCACATATCTGAAGGATTTCGTTCACAAGATAATGTTGATTGTATAGACAAAACATGCCTTCCCAATAACTCATTTGAAGGGGATGAGAAAGATCAGCTCAAAGAAGCATTATTGGAAAAGGAAGTTCATCTGAATGATTCTTCTCACTCGAAGGTTGTTGCTGGGAAATTTTCTGCCTATGATTCTTCTGCCTTGGCAAATAATATGGACCAAACGTTTGACTTTTACGCAAGCAATGATATTATTAAATGGAATAAAGATTCCTATGACTTGACAATTGAAGTTGCTGAAATAAACAGCTTGGAGGAAGCTCAAGATGATAGAGGATTAATAACTGAAGAATTTCATGAATCAGATGATGCTGCAGATATCACTGATGATGAAATTGTAAAGTACATTCCTTATGATGACTATGAAGTATTTGACTTGAGAATTATTCACAGAAAAAACAGGACTGGATTTGAAGAAAGCAAGGATCTTCCAATTGTACTAAATACAGTTATAGCTGGCAGATACTATATAACAGCTTATCTCGGTTCGGCAGCCTTCAGTAAGGTTGTTCAGGCACATGATCTTCACACAGGAGTCGATGTTTGCTTGAAGATCATAAAAAATGACAAAGACTTCTTTGATCAAAGCTTAGATGAGATCAAACTTCTTAAACTTGTCAATAAGCATGACCCGGTTGATCGATTCCACATACTGCGTCTTTATGACTACTTCTATAATCAGGAACATCTATTCATTGTTACCGAGCTCCTGCGAGCAAACTTGTACGAATTTCTGAAATTCAACCAAGAATCTGGTGGTGAAGCATATTTTACAATGAGCAGGTTGCAGCACATTACTCATCAATGTTTGGAGGCATTGCAATATTTGCATAGCTTAGGAATCATTCACTGTGACCTGAAACCCGAAAACATTCTGATAAAAAATTACAAAAGATGTGAGATCAAGGTCATTGATCTGGGAAGTAGTTGCTTTCTAACAGACAACTTGTGTCTATACGTGCAATCACGATCCTACCGGGCTCCTGAAGTGATACTAGGCCTCCCATATGATGAAAAGATCGATATATGGTCCCTCGGCTGCATCTTAGCAGAACTATGCTCCGGCGAAGTGCTCTTTCTAAATGACGCAGTCGTCATGATTCTTGCACGTATGATTGGAATGCTTGGTCCTATTGATCTTGAAATGTTGGTCAAAGGACAGGAGACTCCAAAGTACTTCACCAATGAATTTGATATTTATTATATCAATGAGGAGACAGGTCAAGTTGAGTGTATAATTCCAGAGGAGTCATCATTGGAGCAGCATCTGCAGGTTACAGATAGTATGTTCATGGACTTTGTAAGATACTTGCTTAGCATAAACCCCAAAACAAGACCTACTGCAACACAGGCTTTGAGACATCCATGGCTTTCTCATGTTTATAAGTCAAAGGACAAGAATGTTGGTTGA 1992 0.4051 MAVSDVDAVIEFLRKNGLSDAESALKQDIIEKRDLGSFDYEKFFFPMVPPPPPVRVRSSSRPSPTDCSSEDEFVSLSSSTSNVCSSEFVNPYGLRSSSQNDSESSSDRQSQFGTARDHPEFDIQNENESYWYNEEDDDNFMSPNFEGPDFFSSPTEDKFITTSEMDNDQYENPLNLSHISEGFRSQDNVDCIDKTCLPNNSFEGDEKDQLKEALLEKEVHLNDSSHSKVVAGKFSAYDSSALANNMDQTFDFYASNDIIKWNKDSYDLTIEVAEINSLEEAQDDRGLITEEFHESDDAADITDDEIVKYIPYDDYEVFDLRIIHRKNRTGFEESKDLPIVLNTVIAGRYYITAYLGSAAFSKVVQAHDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPVDRFHILRLYDYFYNQEHLFIVTELLRANLYEFLKFNQESGGEAYFTMSRLQHITHQCLEALQYLHSLGIIHCDLKPENILIKNYKRCEIKVIDLGSSCFLTDNLCLYVQSRSYRAPEVILGLPYDEKIDIWSLGCILAELCSGEVLFLNDAVVMILARMIGMLGPIDLEMLVKGQETPKYFTNEFDIYYINEETGQVECIIPEESSLEQHLQVTDSMFMDFVRYLLSINPKTRPTATQALRHPWLSHVYKSKDKNVG 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1154 663 SMART serkin_6 349 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1154 663 Pfam Protein kinase domain 353 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1154 663 SUPERFAMILY Protein kinase-like (PK-like) 338 657 IPR011009 -
Lele26g1154 663 MobiDBLite consensus disorder prediction 59 73 - -
Lele26g1154 663 PANTHER DUAL SPECIFICITY PROTEIN KINASE 97 652 - -
Lele26g1154 663 Gene3D Phosphorylase Kinase; domain 1 344 430 - -
Lele26g1154 663 ProSiteProfiles Protein kinase domain profile. 349 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1154 663 MobiDBLite consensus disorder prediction 94 124 - -
Lele26g1154 663 MobiDBLite consensus disorder prediction 94 112 - -
Lele26g1154 663 CDD PKc_DYRK_like 349 651 - -
Lele26g1154 663 Gene3D Transferase(Phosphotransferase) domain 1 403 651 - -
Lele26g1154 663 FunFam Serine/threonine-protein kinase ppk15 428 652 - -
Lele26g1154 663 MobiDBLite consensus disorder prediction 51 73 - -
Lele26g1154 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Lele26g1154 663 FunFam Putative serine/threonine-protein kinase dyrk2 343 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1154 Lele-ChrLele26 7466045 7469053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1154 346 646 MAP Kinase Gene Family AT5G19010 32.399 3.68e-34 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lele26g1154 Pkinase 2.8e-53 CL0016