Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1150 ATGGGCGTCCTATTCATAACGCATCATACTGAGCATCCATACATTACTAATTATCGACTATCAATGACGATGAAGAATGTCGCCGGTCATAACGTGGGACAGGGAAGTTTTACATCAGCAGATTTGGATCCCAAAGTGGTTCTTCACTATGGTGTTCCATCTACTGCATCTATCCTGGCTTTTGATCACACTCAACGTCTGTTGGCAATAGGCACTCTAGATGGTCGGATAAAGGTAATTGGTGGTGACAACATTGAAGGGATTCTTTTCTCCTCAAAGCATTGGTCATTCAAAAATTTAGAGTTCTTGCAAAACCAAGGTTTTCTTGTCAGTGTCTCAAATGATAATGGAATACAGGTTTGGGATTTGGAAAGCAGGCATATAGCTTCTGCTTTGCAGTGGGAATCTACTATAACTGCCTTCTCTGTTATCTATGGCACTAGTTACATGTATATCGGAAGCGAGCATGGGATGGTATATGTTTTGAAGTTTGACACTGAAGACAGAAAACTTCTAATCTTGCCTTACTATGTTCCCACCAATGTAATTGCTGAAGCAGCTGGGATGTCACTTGATTGTGTTTCAGTGGTCAGAGTTCTTCATCAACCTTCTTCTGGAGGAAACAGGCAATCACTGTTCTTGGCTTTTTGTTGTATGGCAATGTCTGACACTCATTTTCAGATAAGACTGCTGATTGCATATGAGAATGGCGTGCTTGTACTATGGGATGCTTCTGAAGATAAAGTTGCTCTCATCAGAGGACATAGGGACCTTGAGTTAAAGGATAAACAAATGTTTACTCATCTAAATAACACCGAGGATATGCTGTCTGATAATAAATTATACCATAAAGAAGAGAAGGAGATATGCTCTGTCTGTTGGGCATCTAATAATGGATCAGTTATTGCTGTTGGTTACATCAATGGTGATATAATGTTCTGGGACTTGTCAGCTGCTGACTCTTCCACTGCTCATCAAGCTAAAAAAATGTCAAATCATGTTGTCAAGCTTCAATTATCATCATCAGATAGAAGACTACCTGTCATTTTTCTACATTGGTGTGCAAATAGATCAAACAATAATACTGGGGGCCTTCTATTTGTTTATGGAGGTGATGAAATTGGGTCTCAAGAAGTTCTGACAGTTTTAAGTATTGATTGGTCTTCTGGGATTGAAAGTCTTAAATGCAGTGGCCGTATTGATGTTACACTTAATGGTTCTTTTGCTGATATGGTTTTATTAGCAACTGATTCTTCTTCAGAAAGAGCTTGTAATGTGCTATATGTATTGACAAATCCTGGACAGCTGCATCTTTATGACAATGCTTGCTTGTGTTCCTTAATGTCTCAACATGAAAAAAATGCATCTGTTCCTTCAATGGAATATCCCAGGGTCATACCCACTCTTGAACCATACATGACAACAGCAAAGCTCAGTGTGGTACATGGAGATGGGAAGTTATATCGGACCTTGTCTGAGATCTTGTTAGCTGCTAATCAGAGTGCAGCACATGATCAGACAGGTAGTGATATGAAGTGGCCTTTGACTGGTGGAGTTCCAGGTCATTTTTTGAAAGAAGACCTTCATGTCCTTCAAATGTACATAGCAGGTTACCAAGATGGATCTATTCGGATATGGGATGTCACACATCCTTCTTTGACATTAGTGTACAATATGACATCTGAGGTGAATAGTGCAAGTGATCCAGTATCAGTGTTGGACTTTTGTCCTGATACTTTACGGTTGGCAGTCGGCAATGAACGTGGTCTGGTTCGTCTATATGGGCTAGTTGGGAATTCAGATGAAACGAACATGTACTTTGTGACAGAAAATGAAAGCAAAGTTCAAAAGATCCCTAAAGGGAATGGACCTCATTGTACAGCAGTATTTTCCCTGCAAAGTTCTCCAGTATGCAACCTTAAGTTTGCAAACCTGGGAAGGAAGCTTGCTGTTGGATATGAATGTGGAAGGGTTGCCATGCTTGATATCATAGAACCATCAGTTCTCTTTCTCACCAATGAGGAATCTATTGTATCTTCGCCAATAATTTCTCTGAATGTAAAATTTTCAGATAGTTGTGGCTTACCGAACAGTCCAGAGAAATCTGCAACCATTATTTCTGACAGTCCTGGAAAAGGGCTGTTAATTAATGCAACAAGAGATGCACATGTTGTTGCCACAGATGCTGCATCAGGGGGCATGGCTAACGTTCAGTCTGAAAATGCAACTGTTGAAGCTGAAGCTGTCACAACTGTAGAAAGTTCATATTTTGCTCAGATGTTATTCAACTCACTCATTTTGCTTTGTTATGAGAGTCAATTGAGCATACACTCTGTGAAATCCATCATTGAGGGTAGCAGTAAGTACATTCGGAGGGTGAACCTGGTAAACCGATGTTGTTGGACAACTACATTAATGAAAGATGGAAAAGCGAGTGGGTTGGTTGTACTGTATCAAACTGGAGACATTGAATTAAGGTCCTTACCAACTCTGGAAGTGGTGGGGGAGTGCTCTTTAATGGCAATTCTAAGATGGAGCTTGAAGACCAACATGGAGAAGACAATATGTTCTTCCTCTAATGGACAACTTATTCTGGTCAATGGGAATGAAACTGCTTTTATATCGCTGTTGAAATGTGAAAATGAACTCTGGATTCCTGAGTCATTGCCTTGTCTACATGATAGAGTCCTTGCAGCTGCTGTGGATGCCACAGCAAGCCTACCTTCAAATCAGGGGCGACATTTACCAGGTATCTTGAGTAATGTTGTTAAGAATTTTAAAGCGGTTAAAGTGGAGAAGGCAAATCAAGCAATTCATCATTATAGTTCTGCAAATTTTGAAAAACTTTTCTCCTGTCCCCCCTTCTTAAAGGCTTCCTCAGCCACAGCTGATAAGCAAGATCCATTTGAGCGTAACATAGATGAAATTCACATTGACGAACCTTTAGTTGTTAACTGTACTCAGAAAACTGATACTGACAAGACAGATAGAGGAAAAGGAACAGACAACAAAGGAAAAGGAGCAGAGAAACAGAAATTATTTGAGGGTGCAAGCACTGATACAAAACCGAGACAGAGAACAGCAGAAGAAATCAAGGCCAAATATAGAAAGGGGGGGACCGGGGATGCCTCTGCAGCTGCTTCACTTGCAAAGGAGAAGCTTCATGAACGCGGAGAAAAACTTCAGATGCTCAGCCAACATACTGAAGAACTGCAAAGTGGGGCGGAAGACTTTGCATCAATGGCAAAAGAACTTGCCAAAAGAATGGAAAACCGTAAATGGTGGCAGATATGA 3294 0.4059 MGVLFITHHTEHPYITNYRLSMTMKNVAGHNVGQGSFTSADLDPKVVLHYGVPSTASILAFDHTQRLLAIGTLDGRIKVIGGDNIEGILFSSKHWSFKNLEFLQNQGFLVSVSNDNGIQVWDLESRHIASALQWESTITAFSVIYGTSYMYIGSEHGMVYVLKFDTEDRKLLILPYYVPTNVIAEAAGMSLDCVSVVRVLHQPSSGGNRQSLFLAFCCMAMSDTHFQIRLLIAYENGVLVLWDASEDKVALIRGHRDLELKDKQMFTHLNNTEDMLSDNKLYHKEEKEICSVCWASNNGSVIAVGYINGDIMFWDLSAADSSTAHQAKKMSNHVVKLQLSSSDRRLPVIFLHWCANRSNNNTGGLLFVYGGDEIGSQEVLTVLSIDWSSGIESLKCSGRIDVTLNGSFADMVLLATDSSSERACNVLYVLTNPGQLHLYDNACLCSLMSQHEKNASVPSMEYPRVIPTLEPYMTTAKLSVVHGDGKLYRTLSEILLAANQSAAHDQTGSDMKWPLTGGVPGHFLKEDLHVLQMYIAGYQDGSIRIWDVTHPSLTLVYNMTSEVNSASDPVSVLDFCPDTLRLAVGNERGLVRLYGLVGNSDETNMYFVTENESKVQKIPKGNGPHCTAVFSLQSSPVCNLKFANLGRKLAVGYECGRVAMLDIIEPSVLFLTNEESIVSSPIISLNVKFSDSCGLPNSPEKSATIISDSPGKGLLINATRDAHVVATDAASGGMANVQSENATVEAEAVTTVESSYFAQMLFNSLILLCYESQLSIHSVKSIIEGSSKYIRRVNLVNRCCWTTTLMKDGKASGLVVLYQTGDIELRSLPTLEVVGECSLMAILRWSLKTNMEKTICSSSNGQLILVNGNETAFISLLKCENELWIPESLPCLHDRVLAAAVDATASLPSNQGRHLPGILSNVVKNFKAVKVEKANQAIHHYSSANFEKLFSCPPFLKASSATADKQDPFERNIDEIHIDEPLVVNCTQKTDTDKTDRGKGTDNKGKGAEKQKLFEGASTDTKPRQRTAEEIKAKYRKGGTGDASAAASLAKEKLHERGEKLQMLSQHTEELQSGAEDFASMAKELAKRMENRKWWQI 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1150 1097 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 33 1090 - -
Lele26g1150 1097 ProSiteProfiles Trp-Asp (WD) repeats profile. 90 131 IPR001680 GO:0005515
Lele26g1150 1097 SUPERFAMILY WD40 repeat-like 532 874 IPR036322 GO:0005515
Lele26g1150 1097 CDD R-SNARE_STXBP5_6 1032 1090 - -
Lele26g1150 1097 SUPERFAMILY WD40 repeat-like 54 595 IPR036322 GO:0005515
Lele26g1150 1097 ProSitePatterns Trp-Asp (WD) repeats signature. 109 123 IPR019775 -
Lele26g1150 1097 Gene3D - 186 457 IPR015943 GO:0005515
Lele26g1150 1097 Gene3D - 1027 1089 - -
Lele26g1150 1097 SUPERFAMILY SNARE fusion complex 1048 1089 - -
Lele26g1150 1097 Gene3D - 475 904 IPR015943 GO:0005515
Lele26g1150 1097 Gene3D - 36 178 IPR015943 GO:0005515
Lele26g1150 1097 ProSiteProfiles v-SNARE coiled-coil homology domain profile. 1032 1096 IPR042855 -
Lele26g1150 1097 SMART WD40_4 552 595 IPR001680 GO:0005515
Lele26g1150 1097 SMART WD40_4 82 122 IPR001680 GO:0005515
Lele26g1150 1097 SMART WD40_4 41 81 IPR001680 GO:0005515
Lele26g1150 1097 SMART WD40_4 274 315 IPR001680 GO:0005515
Lele26g1150 1097 SMART WD40_4 484 547 IPR001680 GO:0005515
Lele26g1150 1097 SMART WD40_4 623 662 IPR001680 GO:0005515
Lele26g1150 1097 MobiDBLite consensus disorder prediction 990 1011 - -
Lele26g1150 1097 Pfam Synaptobrevin 1052 1094 IPR042855 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1150 Lele-ChrLele26 7400758 7412111 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1150 26 7400758 7412111 Lele25g1164 25 7577944 7579902 CCT
Lele26g1150 26 7400758 7412111 Lele26g1163 26 7550633 7553020 CCT
Lele26g1150 26 7400758 7412111 Lele27g0915 27 17100284 17102303 CCT
Lele26g1150 26 7400758 7412111 Lele28g1155 28 7527764 7528328 CCT
Lele26g1150 26 7400758 7412111 Lele27g0930 27 17240301 17251255 hybridization
Lele26g1150 26 7400758 7412111 Lele28g1143 28 7406011 7410162 hybridization