Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1145 ATGGAAAATTTCTACTATTCTAGTTCTTCTGCTGGTTCTGGTTCTAGTAGCTGCTGCTGCTGGCCTTTGCAGGGCACCACAAACAGTAATCATCATCATCATCCTTGTCCTTTTTCAGTGCAGACTCCATTGTTGCCTCATGATTCATCATGCTCTCTTCAGTTCTGCGAGTTCCCTCATTCATGGCCTCCTGAAGATAAAGCTTCCGCTGCCTCCAAAAGCCATAGCCAAGCAGAGAAACGCCGTAGGGACAGAATCAATGCTCAGCTTGCCACTCTCAGAAAATTCATCCCCAAGTCTGATAAGATGGACAAGGCAGCATTACTGGGGAGTGTGATAGAGCAAGTGAAGGATCTGAAACGAAAAGCCATGGATATAGGAACATCATTCACAGTTCCTACAGAGATCGACGAAGTATCAATAGACCAAGAAGAAGACGAAGAGAGTTCAATAAGCTCCATCATCGACAACAACAACAACAGCAAAGTGAATTACAAAGTGAAAGGCAACAACAACAAGAAGATAGTGATCAGAGCTTCAGTGTGCTGTGAGGATCGACCAGAACTGTTCTCAGAACTCATCAAAGTTCTGAAAGGGCTGAGGCTGACGACAGTGAAAGCTGACATGGCAAGTGTGGGAGGAAGAATTAAAAGCATATTGGTTCTGTGTTCTAAGGACAGTGACGACGATACTGTTTGTGTTGCCAATCTGAAACAGTCTCTTAAATCTGCTGTCACTAAAATTGCAGCTTCGTCTTCTTCATCAATGGCTTCTACTTGTCCTGCAAGAAGTAAGAGGCAGAGGTTCTTCTTGCCTTCGCCTTGCCTCCATTAA 834 0.4436 MENFYYSSSSAGSGSSSCCCWPLQGTTNSNHHHHPCPFSVQTPLLPHDSSCSLQFCEFPHSWPPEDKASAASKSHSQAEKRRRDRINAQLATLRKFIPKSDKMDKAALLGSVIEQVKDLKRKAMDIGTSFTVPTEIDEVSIDQEEDEESSISSIIDNNNNSKVNYKVKGNNNKKIVIRASVCCEDRPELFSELIKVLKGLRLTTVKADMASVGGRIKSILVLCSKDSDDDTVCVANLKQSLKSAVTKIAASSSSSMASTCPARSKRQRFFLPSPCLH 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1145 277 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 70 119 IPR011598 GO:0046983
Lele26g1145 277 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 70 122 IPR036638 GO:0046983
Lele26g1145 277 Pfam Helix-loop-helix DNA-binding domain 73 119 IPR011598 GO:0046983
Lele26g1145 277 Gene3D - 65 126 IPR036638 GO:0046983
Lele26g1145 277 CDD ACT_UUR-ACR-like 180 215 - -
Lele26g1145 277 PANTHER TRANSCRIPTION FACTOR BHLH30 62 270 IPR045847 GO:0003700|GO:0006355
Lele26g1145 277 SMART finulus 76 125 IPR011598 GO:0046983
Lele26g1145 277 CDD bHLH_AtAIG1_like 65 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1145 Lele-ChrLele26 7364929 7366005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1145 1 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 39.721 2.48e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele26g1145 HLH 7.4e-10 No_clan