Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1144 ATGGCTCTCACCTCAAATCGAGTGAAAGGCTCTTGGAGCCCCCAAGAGGATGCCACTCTCCTCAAGCTCATCCAGCGACACGGCCCTCGCAATTGGTCTCTCATCAGCATCGGCATACCGGGTCGATCCGGCAAGTCTTGCAGGCTCCGATGGTGCAATCAGCTTAGCCCCGGCGTACAACACCGCCCTTTCACTCCCGCCGAAGACGCCCTCATTGTCCAGGCTCACGCCATCCACGGAAACAAGTGGGCCACCATTGCCCGTCTCTTGCCCGGAAGAACCGATAACTCCATTAAGAACCACTGGAACTCTACCCTGCGCCGCCGCCGAGCGGCTGAGATGTCGTGTGCGTCCGGATCCTCAGAGTTGGACTCTATTATGGTAATGAAGAAGCGGCGGGAGCCTTGTGGTCCCCCGAATGCATCGGACGCGTGGGAGTCGGGGCAGCGATTGAGAAGGCAGTGCCTCGGGAGGATTTCGCCGGAAAACAATAGTTACAAGGGTCCAATGGTGGGCCCTGTGACGACGTCGTTGAGTTTGTTACCTCCAGGAGAGAGAGTGGATCACAAAGTGAAAGAAGAGAGTGAGGAAGACGAAGGGGAAGGGAGTGAGAACGGGAAGGGAAAGGAAGAGGAAGAAGAGACGGGCCCGATGAGGATGATGAAGAGGTTGATAGCAGAGGAGGTTAAGGATTATGTTGATAGTTTGCGGGCCGATGATTAG 723 0.5615 MALTSNRVKGSWSPQEDATLLKLIQRHGPRNWSLISIGIPGRSGKSCRLRWCNQLSPGVQHRPFTPAEDALIVQAHAIHGNKWATIARLLPGRTDNSIKNHWNSTLRRRRAAEMSCASGSSELDSIMVMKKRREPCGPPNASDAWESGQRLRRQCLGRISPENNSYKGPMVGPVTTSLSLLPPGERVDHKVKEESEEDEGEGSENGKGKEEEEETGPMRMMKRLIAEEVKDYVDSLRADD 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1144 240 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 55 IPR017930 -
Lele26g1144 240 FunFam MYB transcription factor 9 60 - -
Lele26g1144 240 Pfam Myb-like DNA-binding domain 9 55 IPR001005 -
Lele26g1144 240 Pfam Myb-like DNA-binding domain 63 105 IPR001005 -
Lele26g1144 240 CDD SANT 11 53 IPR001005 -
Lele26g1144 240 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Lele26g1144 240 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Lele26g1144 240 PANTHER MYB PROTEIN-RELATED 9 185 - -
Lele26g1144 240 CDD SANT 63 106 IPR001005 -
Lele26g1144 240 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Lele26g1144 240 Gene3D - 8 60 - -
Lele26g1144 240 SMART sant 60 108 IPR001005 -
Lele26g1144 240 SMART sant 8 57 IPR001005 -
Lele26g1144 240 Gene3D - 63 109 - -
Lele26g1144 240 ProSiteProfiles Myb-like domain profile. 4 55 IPR001005 -
Lele26g1144 240 MobiDBLite consensus disorder prediction 159 223 - -
Lele26g1144 240 MobiDBLite consensus disorder prediction 185 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1144 Lele-ChrLele26 7358925 7359647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1144 7 119 MYB Transcription Factor Family AT4G37260 69.298 2.14e-52 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele26g1144 Myb_DNA-binding 3.2e-15 CL0123