Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1142 ATGGCCGACCCTTCATCCCCTCCGTCTCAGTCCCCTGAGGCCGCCGCCACCACGCCCACTCATCCTTCTTCTCGCAAAACCAAAGGCAAAGGTGGTCCCGACAACAACAAGTTTAGGTTTCGCGGAGTCAGGCAGCGAAGCTGGGGCAAATGGGTCGCCGAGATCCGTGAGCCCCGCAAGCGTACCCGCAAGTGGCTCGGCACTTTCGCCACCGCCGAAGACGCAGCCCGTGCCTACGACCGCGCCGCCCTCATCCTCTACGGCTCCCGCGCTCAGCTCAACCTCCAGCCTTCTCTCGCCTCCTCTTCCTCCTCAGTTTCCTCCTCCTCCTCCCCTTCTCGCCCCTCCAATTCTTCCTCCGGTCAAACCCTCCGCCCCTTGCTCCCCCGTCCCCCAGCCTTCTTTCCCTGCGGCCTTTATAATACTCAGTTTCTCTGCCCAGTCAACAACTCACTACAAGGGCAACATCATCCACAGAAAGTGGTGCAATTATATGGATCCTCGAAATCTGATGTTGGGAATAATACTAATCTCGATGACTCCACTACGACGGCAACCTCGTACCAGAACCGTAGCCATGATCTGCATGCGTCAAATCAGGAGCAGCATAGTCATAGTCTTTGTCATAGTCAGAGTGATTGCATGTACGATGATATGAGCTCCTTGGTAGGATCAGGCTTGATGAGTTCTTCTCAGACTATTATAACGCCGCAGTGGGGGGCCGCTCTGGATCTGCCGGTGGCGGCCGGAGCAGTCAGCGTGGGATCGCCGTCTATGTGGCCGATGACAAATGAGGAAGAGTTACCGTCTTGTCTTTGGGACTATAATGATCCTTTCTTCTTTGATTTTTGA 852 0.554 MADPSSPPSQSPEAAATTPTHPSSRKTKGKGGPDNNKFRFRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAALILYGSRAQLNLQPSLASSSSSVSSSSSPSRPSNSSSGQTLRPLLPRPPAFFPCGLYNTQFLCPVNNSLQGQHHPQKVVQLYGSSKSDVGNNTNLDDSTTTATSYQNRSHDLHASNQEQHSHSLCHSQSDCMYDDMSSLVGSGLMSSSQTIITPQWGAALDLPVAAGAVSVGSPSMWPMTNEEELPSCLWDYNDPFFFDF 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1142 283 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Lele26g1142 283 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 19 210 - -
Lele26g1142 283 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Lele26g1142 283 Gene3D AP2/ERF domain 38 96 IPR036955 GO:0003700|GO:0006355
Lele26g1142 283 MobiDBLite consensus disorder prediction 1 25 - -
Lele26g1142 283 CDD AP2 39 96 IPR001471 GO:0003700|GO:0006355
Lele26g1142 283 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Lele26g1142 283 MobiDBLite consensus disorder prediction 100 127 - -
Lele26g1142 283 SUPERFAMILY DNA-binding domain 40 97 IPR016177 GO:0003677
Lele26g1142 283 MobiDBLite consensus disorder prediction 167 188 - -
Lele26g1142 283 FunFam Ethylene-responsive transcription factor 2 39 97 - -
Lele26g1142 283 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Lele26g1142 283 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Lele26g1142 283 MobiDBLite consensus disorder prediction 100 125 - -
Lele26g1142 283 MobiDBLite consensus disorder prediction 1 41 - -
Lele26g1142 283 MobiDBLite consensus disorder prediction 27 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1142 Lele-ChrLele26 7346863 7347714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1142 23 283 AP2-EREBP Transcription Factor Family AT2G40220 45.695 4.95e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele26g1142 AP2 9.4e-13 CL0081