Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1140 ATGATAAGCATGAAGGGCTATGAGCCCCGTTCCAGTTCCTCCTGCGCCGCCTGCAAGCTCCTCAAGCGCCGCTGCACCCCCACCTGCATCTTCGCCCCCTACTTCCGCTCCGACGAGTGCAAGAAATTCGCCAAAGTCCACAAGGTCTTCGGCGCCAGCAATGTCAGCAAGATCCTCTTCGAGGTCCCCGAGGAGCAGCGCGAGGACACCGTTAACTCCCTTGCCTACGAGGCAGACGCCCGCCTCAAAGACCCCGTTTATGGATGCATTGGCGCCATCGCTCTCTTGCAGACCAAGATGGCCGAGCTCCAGCACGACCTCGCCATCGCCAGGGCCCGTCTCGCTCGTTATTCCTCAGCCTCCGCTTCTTCCTCCGCCGCCGACGTCTTCATTAACAACTTCCCTTCTTCAGTCGACTACGATACCTTCCCTCCTGCTCACGTGGGCCTGCCCCCTTTCCCAGACTCCTCTTCCTCTTGCTACGATGTGGACGATGGGTTATCGTCTTCTCAGGTTCAGTTATCGAGCCGACACGATATGGTTGACGATTTTTTTCAAACCCCATGGCCATATATATTTTGA 582 0.5704 MISMKGYEPRSSSSCAACKLLKRRCTPTCIFAPYFRSDECKKFAKVHKVFGASNVSKILFEVPEEQREDTVNSLAYEADARLKDPVYGCIGAIALLQTKMAELQHDLAIARARLARYSSASASSSAADVFINNFPSSVDYDTFPPAHVGLPPFPDSSSSCYDVDDGLSSSQVQLSSRHDMVDDFFQTPWPYIF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1140 193 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Lele26g1140 193 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 137 - -
Lele26g1140 193 Coils Coil 93 120 - -
Lele26g1140 193 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1140 Lele-ChrLele26 7332510 7333091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1140 4 123 AS2 family AT3G11090 79.167 9.19e-67 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele26g1140 LOB 1.2e-37 No_clan