Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1136 ATGAAAAGTAGTTGGAATTTCAGTCGGTACAGGGATCACCGGGGACTTCTCCGCTTTTTGGTCGTGTGGTTGCTCTTTCAGAGCTTGTTGGGTCTGTGCTTCTCTCTGAATGACGAAGGTAAAGCGCTCTTGAAGTTGAGGCAGAGGATATTGAGTGACCCCTTTGGTGCTTTGTCAAATTGGATTGATGAAGGAGAAGTTGACCCGTGCAATTGGTTCCGAGTTCAGTGCGTAGATGGTAGAGTGGTGGTCTTGAATTTGAAAGATCTTTGCCTTGGAGGAACTCTGGCACCTGAGCTTGCGAACCTTGTTCATATTAAGTCCATAATTCTTCGAAACAATTCTTTCTATGGGATCATACCAGAAGAAATTGCCGAATTGAAAGAGTTGGAGGTTTTGGATTTGGGATACAACAATTTCAGTGGATCTCTACCAGCAGATATTGGGAGTAATATCTCTCTAGCCATCCTTTTGCTGGACAACAATGAGCTTCTTGGTGGGTTCTCTCCCGAAATTAATGAACTGAAGATGCTTTCTGAGAGTCAAGTGGATGAAAACCAGCTTACTAATGCAGCTAAAATGGCATCTTGTGCAAGCAGATCCATCCCACAGAATGTTGGCCAAGACAGTGTGGCTCTGCGAAGACTACTGCAAACTAGAATTGGAAGTCCTTTAAATCGTGGAGAAGATATCTCTCCTTCTGGCCCCGCCCCCGCCCTCGCCCGTGCCCGTGCCCCTGCTCCTGCCCCTGCTGCATCACCATCAACTTCCCGATCCCCTTCAGCAGCACCACCTGTAACACCAAATAACACTTCTGCTGAAAGAAATACTTCTGCATCTCCTTCTCAAAAATTACCCGAAGCAAGATCTAAAAGTACCTCAAAAAACCATCATGTTGCAATTTTGGTTGGAGGTATAGGGGGCGCTGTATTTCTTATCTTAATCGCCACCATATACGTCTGTAGAACCAACAAAGTTACTACTGTCAAACCTGGTGTAACAGGACTGAGTGGACAGCTTCAGAAGGCATTTGTAACAGGTGTGCCAAAGTTGAAAAGGTCCGAGCTCGTAGCAGCATGTGAAGATTTTAGCAATGTAATTGGCACCTCACCAATCGGAACAGTGTACAAAGGGACTTTATCTAGCGGAGTTGAAATTGCTGTAGCATCTGTTACCCTGAAATCGCTGAATGCTTGGTCAAAGACTTTAGAAGTACAGTTCAGGAAAAAGATTGATACGTTATCGAAAGTGAATCACAAGAATTTTGTCAATCTACTTGGATATTGTGAGGAAGAGGAGCCTTTCACCAGAATGATGGTTTTTGAATATGCACCCAATGGAACACTCTTTGAGCATTTACACATAAAAGAAGCTGAGCACTTGGATTGGATAACAAGACTTAGAATTGCAATGGGCATGGCATACTCCCTGCAATACATGCATCAGCTAGACCCTTCTGTAGCCCTAAGCAGCATGAACTCTTACTCCATCTTTCTCACCGAGGACTATGCCGCGAAAATTGCAGATTTGAGTTTCTCGTATGAAATAGCTTCATCCGAGATGAAGACCAAGGGCAGTAAACACGTTGATAATCCATTAGCAAGTCCACAAAGCAACGTTTATGACTTTGGTGTTATACTATTCGAAATGGTAACATCTAGAGTCCCTTATTCAGTTGATAATAGCTCACTTGAAAACTGGGCATCAGATTATTTACAAGGAGACTGCCGTCCCTTGAGAGAAATGGTGGATCCAACTCTAGCCTCTTTCGACGAAGAGAAGCTAGAACAAGTTGCTGAATTGATCAAATCTTGTGGTCATTCTGATCCAAAGCAAAGACCAAGTATGAAGGATGTTAGTATGAGGCTGAGAGAAATAACAACCATGACACCTGAAGCAGCAGTGCCAAGACTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTTTTTCAGCAGATGGCAGCTAA 1965 0.4377 MKSSWNFSRYRDHRGLLRFLVVWLLFQSLLGLCFSLNDEGKALLKLRQRILSDPFGALSNWIDEGEVDPCNWFRVQCVDGRVVVLNLKDLCLGGTLAPELANLVHIKSIILRNNSFYGIIPEEIAELKELEVLDLGYNNFSGSLPADIGSNISLAILLLDNNELLGGFSPEINELKMLSESQVDENQLTNAAKMASCASRSIPQNVGQDSVALRRLLQTRIGSPLNRGEDISPSGPAPALARARAPAPAPAASPSTSRSPSAAPPVTPNNTSAERNTSASPSQKLPEARSKSTSKNHHVAILVGGIGGAVFLILIATIYVCRTNKVTTVKPGVTGLSGQLQKAFVTGVPKLKRSELVAACEDFSNVIGTSPIGTVYKGTLSSGVEIAVASVTLKSLNAWSKTLEVQFRKKIDTLSKVNHKNFVNLLGYCEEEEPFTRMMVFEYAPNGTLFEHLHIKEAEHLDWITRLRIAMGMAYSLQYMHQLDPSVALSSMNSYSIFLTEDYAAKIADLSFSYEIASSEMKTKGSKHVDNPLASPQSNVYDFGVILFEMVTSRVPYSVDNSSLENWASDYLQGDCRPLREMVDPTLASFDEEKLEQVAELIKSCGHSDPKQRPSMKDVSMRLREITTMTPEAAVPRLSPLWWAELEIFSADGS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1136 654 FunFam Nuclear pore complex protein NUP107 36 193 - -
Lele26g1136 654 Gene3D Ribonuclease Inhibitor 35 212 IPR032675 -
Lele26g1136 654 MobiDBLite consensus disorder prediction 224 294 - -
Lele26g1136 654 PANTHER PROTEIN MALE DISCOVERER 2 19 651 - -
Lele26g1136 654 Gene3D Phosphorylase Kinase; domain 1 334 443 - -
Lele26g1136 654 Pfam Protein tyrosine and serine/threonine kinase 364 622 IPR001245 GO:0004672|GO:0006468
Lele26g1136 654 Gene3D Transferase(Phosphotransferase) domain 1 444 635 - -
Lele26g1136 654 FunFam Inactive receptor-like serine/threonine-protein kinase 335 443 - -
Lele26g1136 654 Pfam Leucine rich repeat N-terminal domain 37 77 IPR013210 -
Lele26g1136 654 SUPERFAMILY L domain-like 38 193 - -
Lele26g1136 654 MobiDBLite consensus disorder prediction 252 289 - -
Lele26g1136 654 ProSiteProfiles Protein kinase domain profile. 361 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1136 654 SUPERFAMILY Protein kinase-like (PK-like) 355 643 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1136 Lele-ChrLele26 7311741 7315136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1136 14 619 Receptor kinase-like Gene Family AT5G16000 27.473 6.95e-51 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lele26g1136 PK_Tyr_Ser-Thr 2.7e-25 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1135 25 7312568 7315915 Lele26g1136 26 7311741 7315136 CCT
Lele26g1136 26 7311741 7315136 Lele27g0944 27 17344169 17347520 hybridization
Lele26g1136 26 7311741 7315136 Lele28g1127 28 7298668 7302022 hybridization