Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1132 ATGAACATATGTCCGTTAGATGTGATGTTTTTGATGCATGCATGTTTAGAAGAAGCTGAGATGAATCCCTCGGAAGGCGAGAGGGCATTGAAGAGAGTAAGAGCTAACCAGGGCTCCCTCCACTACCATACCGCCTCTTGCTCCCTCCACAATCCCATCAAAGCCTCAGAAGCCCAAACCATGGCTCCCAACCTTGAATGTCGGATGTACGAGGCCAAGTATCCGGAAGTGGACATGGCCGTTATGATACAGGTCAAGAACATCGCCGACATGGGCGCATACGTCTCACTTCTTGAGTACAACAACATCGAGGGCATGATCTTGTTCTCCGAGCTCTCTCGCCGTCGGATTCGTAGCGTCAGCAGTCTCATCAAGGTCGGCCGCATCGAGCCCGTCATGGTTCTCAGGGTCGACAAAGAAAAGGGTTACATCGATTTGAGCAAGAGAAGGGTGTCTGAGGAGGATATCCAGGCTTGCGAGGAGAGGTACAACAAGAGCAAGCTTGTTCACTCCATCATGCGTCACGTTGCTGAGACTGAGAATATCGATTTAGAGGAGCTGTATGTTCACATCGGATGGCCTGTATATCGCAAATACGGTCATGCTTTTGAGGCATTCAAAATAATTGTTACCGATCCTGATTCAGTTTTGAATTCCCTCACCCGTGAGGTCAAGGAGGTTGGCCCTGATGGGCTGGAGTTGACCAAGGTTGTTCCAGCGGTATCAGAAGAGGTGAAGGAAGCTCTAGTAAAGAACATCAGAAGACGAATGACCCCCCAGCCCTTGAAAATTAGGGCAGATATAGAAATGAAGTGTTTTCAATTTGATGGAGTTCTTCACATTAAGGAAGCAATGCGGAAAGCTGAAGCTGCTGGAAATAATGATTGCCCAGTAAAGATTAAACTTGTTGCTCCTCCACTTTATGTTCTTACCACTCAAACTCTCGACAAGGAGCAAGGAATATTGGTTCTCAAAGATGCTATTGAGGCCTGCACTAAAGCCATAGAGCAACACAAAGGCAAACTAGTTGTGAAGGAGCAACCCAGAGCAGTGAGTGAACGTGATGATAAATTGCTTGCTGAACACATGGCTAAGCTACGCCAAGATAACGAGGAGGTCAGTGGTGATGAAGATAGTGAGGAGGAAGAAGATACAGGAATGGGAGAAGTTGATGTGGACCAGGGTGCTGGGATAACAGAGTGA 1203 0.4746 MNICPLDVMFLMHACLEEAEMNPSEGERALKRVRANQGSLHYHTASCSLHNPIKASEAQTMAPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETENIDLEELYVHIGWPVYRKYGHAFEAFKIIVTDPDSVLNSLTREVKEVGPDGLELTKVVPAVSEEVKEALVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAAGNNDCPVKIKLVAPPLYVLTTQTLDKEQGILVLKDAIEACTKAIEQHKGKLVVKEQPRAVSERDDKLLAEHMAKLRQDNEEVSGDEDSEEEEDTGMGEVDVDQGAGITE 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1132 400 FunFam Eukaryotic translation initiation factor 2 subunit alpha 64 151 - -
Lele26g1132 400 SUPERFAMILY Nucleic acid-binding proteins 67 149 IPR012340 -
Lele26g1132 400 MobiDBLite consensus disorder prediction 373 389 - -
Lele26g1132 400 CDD S1_IF2_alpha 75 150 IPR044126 GO:0003723
Lele26g1132 400 ProSiteProfiles S1 domain profile. 78 149 IPR003029 GO:0003676
Lele26g1132 400 Pfam S1 RNA binding domain 75 149 IPR003029 GO:0003676
Lele26g1132 400 Gene3D - 63 151 IPR012340 -
Lele26g1132 400 SMART S1_6 76 149 IPR022967 -
Lele26g1132 400 SUPERFAMILY eIF2alpha middle domain-like 151 256 IPR024054 -
Lele26g1132 400 FunFam Eukaryotic translation initiation factor 2 subunit alpha 152 256 - -
Lele26g1132 400 SUPERFAMILY eIF-2-alpha, C-terminal domain 260 376 IPR024055 -
Lele26g1132 400 FunFam Eukaryotic translation initiation factor 2 subunit 1 262 384 - -
Lele26g1132 400 Pfam Eukaryotic translation initiation factor 2 alpha subunit 187 317 IPR011488 GO:0003723|GO:0003743
Lele26g1132 400 MobiDBLite consensus disorder prediction 361 400 - -
Lele26g1132 400 Gene3D Translation initiation factor 2; subunit 1; domain 2 152 256 IPR024054 -
Lele26g1132 400 Coils Coil 363 383 - -
Lele26g1132 400 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 61 390 IPR011488 GO:0003723|GO:0003743
Lele26g1132 400 Gene3D EIF_2_alpha 262 384 IPR024055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1132 Lele-ChrLele26 7289785 7296481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1132 62 400 Eukaryotic Initiation Factors Gene Family AT5G05470 81.471 0.0 536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1132 25 7296743 7300274 Lele26g1132 26 7289785 7296481 ECH
Lele26g1132 26 7289785 7296481 Lele26g1132 26 7289785 7296481 ECH
Lele26g1132 26 7289785 7296481 Lele27g0947 27 17358848 17363025 hybridization
Lele26g1132 26 7289785 7296481 Lele28g1124 28 7282549 7286446 hybridization