Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1131 ATGGGAGGCAATTCGCCTTGTGCTTCATGCAAATTACTACGACGCCGTTGCGCCAAAGATTGCATCTTTGCTCCTTATTTCCCTTCCGATGACCCTCAAAAGTTCGCCATCGTTCATAAGGTCTTCGGCGCTAGCAACGTCGGCAAAATGTTGCAGGAGCTTCCAGTTCATCAGAGAGCAGACGCAGTGAGCAGCTTAGTGTATGAAGCGAATGCAAGAGTTCGAGACCCAGTTTATGGTTGTGTTGGGGCCATATCGTTTCTGCAGAATCAAGTTTCAGAGCTTCAAATGCAGCTCGCAGTGGCTCAAGCAGAGATCCTCTGCATCCAGATGCAGCAGGAGCCGGAGCCAGTAGTGGTGCAAAACCCGGAATTTGACCCGAATAATCAGAAACCTTATTTTCCCCAAAACGACCAGTACCTTAGCTTTGCGACTTCCAGCAATAATGCAATCCAGGACTCTCTTCAGAGAGAGAGCTTCTTCGGACACGACATGGTTTCTTGA 504 0.4881 MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPQKFAIVHKVFGASNVGKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSELQMQLAVAQAEILCIQMQQEPEPVVVQNPEFDPNNQKPYFPQNDQYLSFATSSNNAIQDSLQRESFFGHDMVS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1131 167 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Lele26g1131 167 Coils Coil 85 105 - -
Lele26g1131 167 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 133 - -
Lele26g1131 167 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1131 Lele-ChrLele26 7286454 7287064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1131 3 115 AS2 family AT2G30130 92.035 3.00e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele26g1131 LOB 2.5e-42 No_clan