Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1126 ATGTCGCACAAAAAGAGGAATTTACATCAATCAGAGCATCCATTGAAATCTTACCCCTTTGAGGCACTTCTCTCTGGCTCATGGAAAGCTGTGGAGCTCATACAAATTGAGGGAGGAACTTCAACTCTGCATTTTATCAATATCCAAAAAAGAGTTTTGAAGAAAGGTCCCGATTCTGACATTCGGATAAGGTCAAGGAAAGCTACTCTGTCAGATTGCTTCTGTGTTCTAAGACCTGGAATTGATGTATGTGTGTTATCAGCATCTCAACAGGATAATGCTTCAGGGAAAATTTGTCTTGAACCTGAGTGGGTTGATGCTAGAATAAGATCTGTACAGAGAAAGCCCCACGTATCCGAGTGTTCATGTGAATATTTTGTCAACCTCTATTTTAATCAAGGTTGTTATGATAAAGAGAAGAGAATTCTTAATAAGGAGATTAAAATGGTTGGAATAAATCAAATATCCATCCTCCAGAAGCTTGATCGTAATCCCTGTGAAGATCAGCATTATCGTTGGGATTCATCTGAGGATTGCTTTGAAGCACGAAAGACTAAATTGTTTGCAGGACAATTCTTATCTGATCTTTCATGGTTAGTTGTTACGTCAGTTTTGAAGCAGGTCTCATTCTGTGTAAGATCTGTAGAAAGCAAGATTGTGTATCAAATTTTGGGATGTGAACATTCTAGCTCTTCATTGAACTATAATTCTTTTGAACATGTAAATTTCAGAGTAGACAATGGGATGTTAGTACCCATTATTTGTCATCTTGTTCCATCCGACAACAATAAGGTAGACCAAGAAAAAGATGCATATGAAGATGAGATATCACCAATTTCTTGCATTGAGGGCTTACGGCGTTCCAAACGTCGTAACATAGAACCTGAACGTTATCTTGGTTATGATGACATCTCTAAGTTGGATTTTGGTCATGTTCGAACCAGTTTACCCAAGTTCAATACAAGAAATGATGATGAAAAAGATGATGTTGATCTACTAGCAAATTGTCTAGAAAAAGACATAGATGCTTGTCAAAATATTAAGAAGATAAATACCTGTCAGGAGGTCCTAGCGGACAATGGTAGGCCTGCAAGTGGGAAGATGAAGCTTGATAATGTTGATAAAAAAGGTCATGAGACTCAACTTTTTAGTGATTCCCTGCCTGATGGAGATGGTTCAGTAGCCCTTGACCATTCTTTTCTCAATACCAATAGCACTGGAAATTCTAGGCATGAAAATTGTGTTTTTTCTGAATATGATCATCTGACTCATAGCCCTGAACTGAACAGGAAAATTGTTGATCCATGGACATTTGAACCCTATGATTATCAATCAAAAGTTCCCGATCCTGAAAATTCTGCAATAGAGATTGATGATAAATCTTCTGTATGTTATCACTTTGGTACCTGTAATGTTCAGAGGAAGGATTCATCTGGTTCGGAGGACATGGATGCTGAAAATAGATGGGAAGGGATACATTCTGATAAAGAAATTCAGGAAAAAGAATATCATCCACCAGTGACAAGAAGTAAAAGTCGTGAGGAAGAAAGAACTTGCAAAGACAGATACCTAAGTGATGCTGAAAATTCTGCTAAAGAGATTGGTGATAAATCTTCTGGATGTTATTGTTTTGGTACCTGTAATGTCCCGAGGAAGGATTTATCCGGTCAGGAGGACATGGATACTGAAACTAGATGGGAAGGGGTTCATTCCGATAAAGAAATTCAAGGGGAAATATATCATCCGCCAGTGACAAGAAGTAAGAGTCATGGGGTAGAAAGAACTTACAAAGACAGATCCTTAAGTGATGCAGAAAATTGTGCAAAAGAGATTGGTGATAAATCTTCTGGATGTTATTGTTTTTGTACCTGTAATGTCCCGAGGAAGGATTTATCCGGTCAGGAGGACATGGATACTGAAAATAGATGGGAAGGGGTTCATTCCGATAAAGGAATTCAAGGGGAAATATATCATCCGCCAATGACAAGAAGTAAGAGTCATGGGGTAGAAAGAACTTACAAAGACAGATCCTTAAGTGATGCCAAAAATTGTGCAAAAGAGATTGGTGATAAATCTTCTGGATGTTATTGTTTTGGTACCTGTAATGTCCCGGGGAAGGATTTATCCGGTCAGGAGGACATGGATACTGAAAATAGATGGGAGGGGGGCCATTCCGATAAAGGAATTCAAGGGGGAAAATATCATCCACCAATGACAAGAAGTAGGAGTGGTGGGGAAGAAAGAACTTACAAAGAAAGATCCTTAAGTGATGCTGGAAATTCTGCGGAAGAGATTGGTGATAAATCTTCTAGATGTTATTATTTTGGTACCTGTAATGTGCAGAGGAAGGATTTATCTGGTCTGGAGGACATGGGTGCTGAAAATAGATGGGAAAGGATACGTTCCAATAAAGAAATTCAAGGGAAAAAATATCATTCCCCAATGACAAGAAGTAATAGTTATGGGCAAGAAAGAACTTGTAAAAAGGGATCCTTAAGTGATGCTGCCTACATGGAATTGATAGATTTGTACTTAAAGAATACTGACAAGGCGCCAACTGAGGAGCCGCCTATAACTGACCAGTGGGTAGAATTTAAGGCAATAAGCGACTATGGGCAAAACGGGGGAGCACAAGCTGACGAAGAAGTTTCTGAAATTGATATGTTGTGGAGAGAAATGGAAGTTTCATTAGCATCAAATTATGTGTTTGATAACACAGAGGGTTCAAAGGCTGCAGTCTTTTCTGAGACTGAGGAGAATTCTTACAAACTTTGTCAACACGATTTTAGATTGGATGAAGAAATTGGGATTTACTGCCGTATATGTGGCCTTGTGAGAACAGAGATAAGAGACATAACACCCCCCTTTTTGCAGAACTCGGGATGGCAACAAGATGAAAAGGAGTGGAATGCTGAAAATTTGGAGGTAAAGGCCGATGAGAATGATAGTTTACATCTTTTCTCAGATCACACTTCAACTGATATGCCTGTATCTGAAGAAAATGATATCTGGGGACTGATCCCCGAACTTACTAGTAAGTTGCATGTTCACCAGAAAAAAGCTTTTGAATTTCTTTGGAAAAATATTTCTGGATCTGTGGAACCAGCATCTGTGAAAGCTACATCTAAAAGAATAGGTGGCTGTGTGATATCTCATTCACCTGGAGCTGGAAAAACTTTTCTAATTATTGCATTTCTTGCAAGCTACTTGAAGTTGTTCCCAGGAAAGAAACCTTTGGTCCTTGCTCCAAAGACAACACTTTATACTTGGTATAAAGAATTGATCAAATGGGAAATTCCTATACCAGTGTATCTGATTCAATCTCAACGTCGAGCCCGTGGAGCATGCAAGGAGAAGTCAATGGTTATTCCTGGTGTTCCAAATCCCTCTGGAGATGTCAGGCATCTTTTGGACTCTCTGGAAAAGATACAGAAGTGGCAGTCTCACCCTAGTGTTCTAATCATGAGTTATACTTCCTTTTCTAGGCTGATGGGAGAGAATTCAAAGCTTTCCTACCGAAACTATATGGCTAAAGTCTTGAGGAAAAATCCTGGGGTTCTTATTCTTGATGAAGGGCACAATCCTAGAAGTACAGAATCATGTTTGAGGAAAGCCTTAATGAAAGTAGACACGGAATTGAGAATACTACTTTCAGGTACATTGTTTCAGAATAATTTCTGTGAATACTTCAACACTCTCTGCTTGGCAAGACCAAAATTTGTTCATGAAGTGCTGAGAGAATTAGACCCCAAGTACATGAGGGAAAAAGGTAGAGCTGAAAGAAAACCGAAGTTTATAGAATCACGGGCAAGAAAGTTCTTCTTAGAAAAAATTGCAAAAAAAATAGACTCTGATAATAAGGATGAGAGACTGCAGGGTCTAAACATGTTAAGAAAGATCACAAATGAATTTATAGATGTTTATGAAGGTGGAAGTTCTGATAATCTTCCTGGTTTGCATGTTTATACATTGTTAATGAATATTACTGATTGTCAAGATCAGAGTTTTCGAGCACTTTATGAAAAAATAGCCGACTCCAATCGATATCATCTGGAGGTGGAGCTTTTGGTAACCCTCGGAGCAATACATCCATGGCTAATCACAACGGCCGCATGCTCTGATAAGTTTTTAACCAAGGCTCAAAGGTGGGAGCTGGGAAAATGCAAGTTTGATTTGAATATAGGACCAAAAGTAAGGTTTGTTTTGAGCCTTGTATATCGTGTTTACAAGGAGGAAAAGACTCTTGTTTTTTTCCACTACATTGCACCTATGAGATTGTTTGTAGAACTATTTGAGAAAACCTTTGGATGGAAGATAGGTCGTGAAGTTTTGGTCCTTTGTGGGGAACAAGATCTCTTTGAACGCGGGAGAGTCATCGATAAGTTTGAGGAGCCTGGAGGAGCATCAAAGGTACTCCTTGCTTCAATTACAGCCTGTTCTGAAGGCATTAGTCTGACAGCGGCTTCTCGCGTGATTTTGTTGGACTCAGAGTGGAATCCATCAAGAACAAGGCAAGCCATCGCCCGTGCCTTTCGTCCCGGTCAGCAAAGGATCGTATATGTGTATCGGCTTTTGGTGACAGGCACAATGGAGGAACAAAAGTATAGCAGAACCACTTGGAAAGAGTGGGTTTCAAGGATGATTTTTAGTGAGGACTTTGTGGAGGATAAATCCCAATGGCAATTAGAAAAGCTTGAAGATGACATCCTTCAGGAAATGATTGCAGAAGACAAGTCCAAAATATTCCATATGATAATGAAGGATGAGAAGGCTTCAACCAACTGA 4785 0.3927 MSHKKRNLHQSEHPLKSYPFEALLSGSWKAVELIQIEGGTSTLHFINIQKRVLKKGPDSDIRIRSRKATLSDCFCVLRPGIDVCVLSASQQDNASGKICLEPEWVDARIRSVQRKPHVSECSCEYFVNLYFNQGCYDKEKRILNKEIKMVGINQISILQKLDRNPCEDQHYRWDSSEDCFEARKTKLFAGQFLSDLSWLVVTSVLKQVSFCVRSVESKIVYQILGCEHSSSSLNYNSFEHVNFRVDNGMLVPIICHLVPSDNNKVDQEKDAYEDEISPISCIEGLRRSKRRNIEPERYLGYDDISKLDFGHVRTSLPKFNTRNDDEKDDVDLLANCLEKDIDACQNIKKINTCQEVLADNGRPASGKMKLDNVDKKGHETQLFSDSLPDGDGSVALDHSFLNTNSTGNSRHENCVFSEYDHLTHSPELNRKIVDPWTFEPYDYQSKVPDPENSAIEIDDKSSVCYHFGTCNVQRKDSSGSEDMDAENRWEGIHSDKEIQEKEYHPPVTRSKSREEERTCKDRYLSDAENSAKEIGDKSSGCYCFGTCNVPRKDLSGQEDMDTETRWEGVHSDKEIQGEIYHPPVTRSKSHGVERTYKDRSLSDAENCAKEIGDKSSGCYCFCTCNVPRKDLSGQEDMDTENRWEGVHSDKGIQGEIYHPPMTRSKSHGVERTYKDRSLSDAKNCAKEIGDKSSGCYCFGTCNVPGKDLSGQEDMDTENRWEGGHSDKGIQGGKYHPPMTRSRSGGEERTYKERSLSDAGNSAEEIGDKSSRCYYFGTCNVQRKDLSGLEDMGAENRWERIRSNKEIQGKKYHSPMTRSNSYGQERTCKKGSLSDAAYMELIDLYLKNTDKAPTEEPPITDQWVEFKAISDYGQNGGAQADEEVSEIDMLWREMEVSLASNYVFDNTEGSKAAVFSETEENSYKLCQHDFRLDEEIGIYCRICGLVRTEIRDITPPFLQNSGWQQDEKEWNAENLEVKADENDSLHLFSDHTSTDMPVSEENDIWGLIPELTSKLHVHQKKAFEFLWKNISGSVEPASVKATSKRIGGCVISHSPGAGKTFLIIAFLASYLKLFPGKKPLVLAPKTTLYTWYKELIKWEIPIPVYLIQSQRRARGACKEKSMVIPGVPNPSGDVRHLLDSLEKIQKWQSHPSVLIMSYTSFSRLMGENSKLSYRNYMAKVLRKNPGVLILDEGHNPRSTESCLRKALMKVDTELRILLSGTLFQNNFCEYFNTLCLARPKFVHEVLRELDPKYMREKGRAERKPKFIESRARKFFLEKIAKKIDSDNKDERLQGLNMLRKITNEFIDVYEGGSSDNLPGLHVYTLLMNITDCQDQSFRALYEKIADSNRYHLEVELLVTLGAIHPWLITTAACSDKFLTKAQRWELGKCKFDLNIGPKVRFVLSLVYRVYKEEKTLVFFHYIAPMRLFVELFEKTFGWKIGREVLVLCGEQDLFERGRVIDKFEEPGGASKVLLASITACSEGISLTAASRVILLDSEWNPSRTRQAIARAFRPGQQRIVYVYRLLVTGTMEEQKYSRTTWKEWVSRMIFSEDFVEDKSQWQLEKLEDDILQEMIAEDKSKIFHMIMKDEKASTN 1594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1126 1594 Pfam SNF2-related domain 1013 1338 IPR000330 GO:0005524|GO:0140658
Lele26g1126 1594 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1039 1239 IPR014001 -
Lele26g1126 1594 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1400 1585 IPR001650 -
Lele26g1126 1594 MobiDBLite consensus disorder prediction 740 758 - -
Lele26g1126 1594 SMART helicmild6 1429 1514 IPR001650 -
Lele26g1126 1594 Pfam Helicase conserved C-terminal domain 1398 1513 IPR001650 -
Lele26g1126 1594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1314 1580 IPR027417 -
Lele26g1126 1594 MobiDBLite consensus disorder prediction 652 672 - -
Lele26g1126 1594 MobiDBLite consensus disorder prediction 492 520 - -
Lele26g1126 1594 MobiDBLite consensus disorder prediction 709 764 - -
Lele26g1126 1594 Gene3D - 1317 1594 IPR027417 -
Lele26g1126 1594 SMART ultradead3 1010 1247 IPR014001 -
Lele26g1126 1594 CDD SF2_C_SNF 1389 1525 - -
Lele26g1126 1594 Gene3D - 986 1281 IPR038718 -
Lele26g1126 1594 MobiDBLite consensus disorder prediction 710 728 - -
Lele26g1126 1594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1004 1252 IPR027417 -
Lele26g1126 1594 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 54 1593 IPR044567 GO:0080188
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1126 Lele-ChrLele26 7256415 7262329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1126 1412 1566 RAD5 or RAD16-like Gene Family AT5G43530 34.839 2.34e-12 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Lele26g1126 SNF2_N 4.2e-17 CL0023