Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1104 ATGGATTGCTCAGTATGCACAACAATGCCATTGATATTAAGGCCACCAAGGAACACCATATGTGGGGCCTGTTATGAAGGAGCCAGGAGCATTCTGAATATGATGAACAAGCTTGAATCTGATGGATCAGTGGATAATCCCAATGCTTCTCCAGCTTCACCCTCCCATAATTCGACCTTCCTTGAAAGCTTTGTTGATGCATTCAAAGCACAAACTCACACTGATATAACTGTCACTCCTGGCAATAACGGCCCTCCAATACCTTCCCATAAAGCAGTTTTGGCGACAAGGTCAGAGGTTTTCAAGAACATGTTAGATTCAGATGAATGCAAAGCTGCACCAACTAACAACATTACAATACCTGAATTGAACTACGAAGAGCTAGAGAATCTTCTGGAGTTTCTCTACAGAGGGAACTTGGGTCCAGAAAAATTGGGGAAGCATGTATTTGCCTTGTCACTCGCAGCTGATAAATATGGGATTGCTTATTTACAGAAGCAATGCGAGCAGCATATGCTGAATTCACTAAGCATATCTAATGCGCTTGATGTGTTGGAAATTGCAGACACATGTTCCAACCAGAAGTTGAAGGACACTGCTATGAAGTTCTCAGTTGAAAACATTCAGGACATAGTTTTGTCCTCAAGATATGAAGTATTTGTGCACAGAAGCCCCCTTTTAACTGTGCAACTTTCCAGGGAATTATTGAAGGTTGTCAATATCAAATGA 729 0.4156 MDCSVCTTMPLILRPPRNTICGACYEGARSILNMMNKLESDGSVDNPNASPASPSHNSTFLESFVDAFKAQTHTDITVTPGNNGPPIPSHKAVLATRSEVFKNMLDSDECKAAPTNNITIPELNYEELENLLEFLYRGNLGPEKLGKHVFALSLAADKYGIAYLQKQCEQHMLNSLSISNALDVLEIADTCSNQKLKDTAMKFSVENIQDIVLSSRYEVFVHRSPLLTVQLSRELLKVVNIK 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1104 242 SMART BTB_4 74 176 IPR000210 GO:0005515
Lele26g1104 242 ProSiteProfiles BTB domain profile. 74 144 IPR000210 GO:0005515
Lele26g1104 242 SUPERFAMILY POZ domain 52 174 IPR011333 -
Lele26g1104 242 CDD BTB_POZ_ZBTB_KLHL-like 73 121 - -
Lele26g1104 242 Gene3D Potassium Channel Kv1.1; Chain A 44 176 IPR011333 -
Lele26g1104 242 Pfam BTB/POZ domain 68 175 IPR000210 GO:0005515
Lele26g1104 242 Gene3D - 177 240 - -
Lele26g1104 242 CDD BACK 177 237 - -
Lele26g1104 242 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 20 238 IPR044784 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1104 Lele-ChrLele26 7144459 7145464 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele26g1104 BTB 6.1e-21 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1104 26 7144459 7145464 Lele25g1104 25 7149221 7149722 CCT
Lele26g1104 26 7144459 7145464 Lele27g0973 27 17511262 17511763 CCT
Lele26g1104 26 7144459 7145464 Lele28g1097 28 7127064 7127567 CCT
Lele26g1104 26 7144459 7145464 Lele26g1104 26 7144459 7145464 ECH
Lele26g1104 26 7144459 7145464 Lele27g0972 27 17508177 17509198 hybridization
Lele26g1104 26 7144459 7145464 Lele28g1098 28 7129832 7130828 hybridization