Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1079 ATGGCACACGTGGAATCAGACTACTTGAGCTCTTGGTATCAAAAAATATGCTATACCCTGCTCTGCTCTGTTCTGTTCATTCAAGTCGCAACATTCTCTGCTTTCTCTCTTCTCTTCACCCTTCTTCTTAACCTTCAAGGCTCCTTTGGTGACAATGGAGGATGGCAAGGTGGCCATGCCACATTTTATGGTGGCGGCGATGCTTCCGGGACAATGGGAGGAGCTTGTGGGTATGGGAATTTATACAGTCAAGGTTATGGAACAAACACTGCAGCATTAAGCACTGCTCTGTTCAACAGTGGTCTGAGCTGTGGATCTTGCTATGAAATGAGATGCAGTGGTGACGCCAAATGGTGCCTCCCTGGTTCCATTCTTGTCACTGCCACTAACTTCTGCCCTCCTAACTTTGCTTTGGCCAATAACAATGGCGGTTGGTGCAACCCTCCTCTGCAACACTTTGATCTCGCTGAGCCTGCTTTCTTGCAGATTGCTCAATACAAAGCTGGGATTGTTCCTATTTCTTTCAGAAGAGTCCCCTGTGTTAAGAAGGGAGGGATCAGATTCACCATCAATGGCCACTCATACTTCAACTTGGTTCTGATCACAAACGTTGGAGGAGCTGGGGATGTTCATTCTGTGTCAATCAAAGGTTCAAGGACCGGTTGGCAAACCATGTCAAGGAACTGGGGCCAGAACTGGCAGAGCAATGCCTACCTCAATGGCCAGAGCCTGTCCTTCCAAGTCACAACCAGCGATGGCAGAACCATCACCAGTAACAATGTTGTGCCGGCAAACTGGCAATTTGGACAGACATTTACCGGTGGACAATTTTAG 834 0.4796 MAHVESDYLSSWYQKICYTLLCSVLFIQVATFSAFSLLFTLLLNLQGSFGDNGGWQGGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNSGLSCGSCYEMRCSGDAKWCLPGSILVTATNFCPPNFALANNNGGWCNPPLQHFDLAEPAFLQIAQYKAGIVPISFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVHSVSIKGSRTGWQTMSRNWGQNWQSNAYLNGQSLSFQVTTSDGRTITSNNVVPANWQFGQTFTGGQF 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1079 277 PANTHER EXPANSIN-A15 35 277 IPR002963 GO:0009664
Lele26g1079 277 PRINTS Expansin/Lol pI family signature 222 236 IPR007118 GO:0005576
Lele26g1079 277 PRINTS Expansin/Lol pI family signature 260 274 IPR007118 GO:0005576
Lele26g1079 277 PRINTS Expansin/Lol pI family signature 72 90 IPR007118 GO:0005576
Lele26g1079 277 PRINTS Expansin/Lol pI family signature 94 112 IPR007118 GO:0005576
Lele26g1079 277 PRINTS Expansin/Lol pI family signature 168 184 IPR007118 GO:0005576
Lele26g1079 277 PRINTS Expansin/Lol pI family signature 54 69 IPR007118 GO:0005576
Lele26g1079 277 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 195 274 IPR007117 -
Lele26g1079 277 SMART dpbb_1 90 175 IPR007112 -
Lele26g1079 277 SUPERFAMILY PHL pollen allergen 182 274 IPR036749 -
Lele26g1079 277 FunFam Expansin 185 277 - -
Lele26g1079 277 Pfam Lytic transglycolase 90 174 IPR009009 -
Lele26g1079 277 Gene3D - 44 180 IPR036908 -
Lele26g1079 277 FunFam Expansin 44 181 - -
Lele26g1079 277 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 73 185 IPR007112 -
Lele26g1079 277 SUPERFAMILY Barwin-like endoglucanases 54 203 IPR036908 -
Lele26g1079 277 Gene3D - 184 277 IPR036749 -
Lele26g1079 277 Pfam Expansin C-terminal domain 186 263 IPR007117 -
Lele26g1079 277 PRINTS Expansin signature 184 196 IPR002963 GO:0009664
Lele26g1079 277 PRINTS Expansin signature 231 252 IPR002963 GO:0009664
Lele26g1079 277 PRINTS Expansin signature 124 134 IPR002963 GO:0009664
Lele26g1079 277 PRINTS Expansin signature 143 160 IPR002963 GO:0009664
Lele26g1079 277 PRINTS Expansin signature 85 99 IPR002963 GO:0009664
Lele26g1079 277 PRINTS Expansin signature 196 217 IPR002963 GO:0009664
Lele26g1079 277 PRINTS Expansin signature 260 276 IPR002963 GO:0009664
Lele26g1079 277 PRINTS Expansin signature 112 123 IPR002963 GO:0009664
Lele26g1079 277 PRINTS Expansin signature 160 173 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1079 Lele-ChrLele26 6989930 6991848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1079 26 277 Expansin Gene Family AT2G40610 78.261 1.23e-149 417