Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1078 ATGTCGTTTCCCAACCATCCTCCTCCCTCCTCTTCCTCCTCTCGAGGCCCCTTCCACCGCCGCGCCCAATCCGAGGGACAATTCCGATTGCCCGACAACTTCGATCTCGAACCTTCCCTCTTCGATGCCCCTTCCTCCTTCCAAGATCTAGCCACATCTGAGGACGACCTCTTCTCCGCCTATATGGATCTTGACAAATCCGGATCCCAACTTCACTCTCCTTCATCCGACCCCACCAAACCTGGAACCTCCGACACTCATAATGCCAATGCTGCACCCGCTGGGACCAGCGCCGACGGTGATAATCCTCCCCGGCCTCGGCATCGCCACAGCAATTCAGCCGATGGCACTTTCGTGCTCGAGGCCATTGACACTAAGAAGGCAATGGCTCCCGATAAGCTTGCCGAATTGTGGACTGTCGATCCTAAGCGAGCAAAGAGGATTCTGGCAAATCGCCATTCTGCCGCTCGTTCAAAAGAGAGGAAAGCGCGCTATGTAGTAGAACTTGAGAAGACAATTCAAACCCTTCAAACAGAAGCAACCACTCTTTCCGCTCAATTAAATCTTTTCCAGAGAGATACAACTGGTTTGACTAGTGAAAATACAGAGCTGAATCTTCGGTTACAAGCTATGGAGCAACAAGCTAAGTTACGTGATGCTCTTAATGAAGCACTGAAGAAAGAGGTTGATAGGCTTAAGGTTGCTACGGGAGAGACAGTAACTCCATCCTTAACCCAAACCTATAATATGCAAGCGCATCAAATTCCATACTCTCAAGGTTCTTTCTTCTTACGTCAGCCACAGTGTGGACCAGCTGGGGAACCTCAGATTATGCATATGCAGCAGTTACATGCACTCTCATCAAATTTGCCAAATCCTCATCATCAGCCTCTGCTTGCTATAGCCAGCCCGCACGACTTGTCGGAAATGTTGCCTCAGGAAGCTATTGGCCAATTTCAGGGTCTAGAAATAAGCACCGGGGGTGCTCCCCTTCTGACGCCTGATGATTCCTCTGGTTCTGTCAAACAAATCAGCAGTGCCTTTTGA 1047 0.4995 MSFPNHPPPSSSSSRGPFHRRAQSEGQFRLPDNFDLEPSLFDAPSSFQDLATSEDDLFSAYMDLDKSGSQLHSPSSDPTKPGTSDTHNANAAPAGTSADGDNPPRPRHRHSNSADGTFVLEAIDTKKAMAPDKLAELWTVDPKRAKRILANRHSAARSKERKARYVVELEKTIQTLQTEATTLSAQLNLFQRDTTGLTSENTELNLRLQAMEQQAKLRDALNEALKKEVDRLKVATGETVTPSLTQTYNMQAHQIPYSQGSFFLRQPQCGPAGEPQIMHMQQLHALSSNLPNPHHQPLLAIASPHDLSEMLPQEAIGQFQGLEISTGGAPLLTPDDSSGSVKQISSAF 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1078 348 Pfam bZIP transcription factor 143 201 IPR004827 GO:0003700|GO:0006355
Lele26g1078 348 MobiDBLite consensus disorder prediction 331 348 - -
Lele26g1078 348 Coils Coil 166 193 - -
Lele26g1078 348 MobiDBLite consensus disorder prediction 66 95 - -
Lele26g1078 348 SMART brlzneu 139 203 IPR004827 GO:0003700|GO:0006355
Lele26g1078 348 CDD bZIP_plant_RF2 144 193 IPR044759 GO:0003700|GO:0006355
Lele26g1078 348 SUPERFAMILY Leucine zipper domain 143 197 IPR046347 GO:0003700|GO:0006355
Lele26g1078 348 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 5 296 - -
Lele26g1078 348 MobiDBLite consensus disorder prediction 327 348 - -
Lele26g1078 348 MobiDBLite consensus disorder prediction 1 20 - -
Lele26g1078 348 Gene3D - 142 194 - -
Lele26g1078 348 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 141 204 IPR004827 GO:0003700|GO:0006355
Lele26g1078 348 MobiDBLite consensus disorder prediction 61 116 - -
Lele26g1078 348 MobiDBLite consensus disorder prediction 1 48 - -
Lele26g1078 348 Coils Coil 208 228 - -
Lele26g1078 348 FunFam probable transcription factor PosF21 142 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1078 Lele-ChrLele26 6980636 6983598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1078 9 328 bZIP Transcription Factor Family AT2G40620 53.353 9.05e-94 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele26g1078 bZIP_1 4.2e-08 CL0018