LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele26g1067	ATGGCCACTACTGTTTCCCCAGAAAGTAGCTTGCTCTCACCCAAGAATAAGAACATAGATGTGATCGGAGAGCTCCTCCAGGGTTACCGGTCTGCTTCCCAGCTTAAGTTTCTGCTCCAGAAGCCTTTCGATGATTATGGGCCTCTTTCTGCTCATCAACATTTGGCCATCGTTCTTAGATCTTTCACCCACTCTCTTTCTCTTCTCACTTCTTCCTCCTCTGACGACGACGTCGACGCTGCTCAGAATCTGGTTGTTTCCGGTGAGAATGAGCGGCCACCGCCGCCGCCCTACTACTGCCTTGACCGGAAGTCTCCCGACGAGAGCGAGACTAGGGGGAGATCCGCGCCGGCCACCAAGAGTCGGAGAGGTTGCTACAAAAGAAGGAGGACTGAGCAAACATGGACCGTAGTCTCTTCCTCTGCGGATGATAATCATGCATGGAGAAAGTACGGACAGAAGGAAATCCTAACTTTCAAATTTCCCAGGAGTTACATGAGGTGTACTCGCAAGTATGAACAAGGTTGTCGGGCATTGAAGCAGGTGCAGCGAATCCAAGAGAAACCTGAACTCTATCAGATTACGTACATCGGAGATCACACATGTAAAGACATCCTCAAGACACCCCAAGTGGTCACAGATTCTGGTAATAATTGGGAATCATTCTTCGCTGCAGATTCAAAGATTATATCAAACGAAGTAAATAATAAGGTGCATCATCATCCCATAAAACAACAGCATCATCGTCGTCGTCGTCCAGAGGAGACACCGAGTGATGATTTCACCGACAGCAGCTTGGACCCTAGTTTGTGGTTGGATCTGAAAGATCTCTCCGAGGCTGCAATGGTTTCTTTGGGTTGTTCTGATGATAACAATAATAATGCAGATACTGTGTATTAA	900	0.4756	MATTVSPESSLLSPKNKNIDVIGELLQGYRSASQLKFLLQKPFDDYGPLSAHQHLAIVLRSFTHSLSLLTSSSSDDDVDAAQNLVVSGENERPPPPPYYCLDRKSPDESETRGRSAPATKSRRGCYKRRRTEQTWTVVSSSADDNHAWRKYGQKEILTFKFPRSYMRCTRKYEQGCRALKQVQRIQEKPELYQITYIGDHTCKDILKTPQVVTDSGNNWESFFAADSKIISNEVNNKVHHHPIKQQHHRRRRPEETPSDDFTDSSLDPSLWLDLKDLSEAAMVSLGCSDDNNNNADTVY	299

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele26g1067	299	Pfam	WRKY DNA -binding domain	143	203	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele26g1067	299	MobiDBLite	consensus disorder prediction	103	117	-	-
	Lele26g1067	299	Gene3D	WRKY domain	124	204	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele26g1067	299	ProSiteProfiles	WRKY domain profile.	143	200	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele26g1067	299	MobiDBLite	consensus disorder prediction	85	127	-	-
	Lele26g1067	299	MobiDBLite	consensus disorder prediction	240	264	-	-
	Lele26g1067	299	PANTHER	WRKY TRANSCRIPTION FACTOR 21-RELATED	28	239	IPR044810	GO:0003700
	Lele26g1067	299	SUPERFAMILY	WRKY DNA-binding domain	139	203	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele26g1067	299	SMART	WRKY_cls	142	204	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele26g1067	Lele-ChrLele26	6904699	6907061	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele26g1067	15	213	WRKY Transcription Factor Family	AT3G56400	40.488	6.42e-43	147

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Lele26g1067		WRKY	2.9e-21	CL0274