Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1066 ATGCTTCGAAGTTGGAGCACGCCGCCGCCATTGCCATTGGCCCCTCCGAGGACCCCGTCATCGTCGTCGTCTTCACCATCGTCTTCTGCTGCTCGTGACAGTAGACGACCCTCCTTTCTCAGAAGCACTCCTTCAACTACCAGAATCTCCCTCCCTCCTCCTCCTCCTCTGTCTTCAAACTCTCATCCTAGCCCTCAAAGAATGACGCTCTCCACCAGCTGTTTTGGGGCCAGTAACCCCATTCCCATATCCGGAAAACCCGATTTGGAAAACCAAGAACCCCAATCCAATGACCCTCAGTCGCTTGTGGTGGTGTCCTTCTACAAGTTTGCGGATTTTCCTGCCCACGCCAACCTGCGGAAACCCTTGAAGGCACTCTGTGAAGAACTGCGCGTTTCAGGGGGTATCATTCTTGCGCCTGAAGGAACCAATGGCAGCATATGTGGCACCCGCGAGTCGGTGGAGAAAGTTCTTGCGTTTATACAAAGTGATAACCGTCTTAAGGGTCTAAGACAAGTGGAATCACCTGTGAGTCCTGAGGAAGAAGCTATTCATCACGGACATAGTGCCATTTCTCCTCTTGCTGCAGGGGAAGATGCACCTTTCCGATGGGATCATGTGAGGGTTAAGTTGAAGAAAGAGATTGTTACGCTTGGGATGCCTACTGTATCACCTATTGAAAGGGTTGGAAAGCATGTGAGCCCCAGAGATTGGAATACTCTGATTAGTGATCCAGATATAGTGGTGATTGATGTGCGGAACGATTATGAAACCAGAATAGGAAAGTTTAAAGGAGCCGTTGATCCACGCACAACATCATTTCGTGAATTCCCTTCCTGGGTGGAGGATCATTTTGAGCTTACTAGAAACAAGGGCAAGCCTGCAATAGTTGAGGGAAACAAGTCAGGTGAAAGTGTAGAAAAGGATACAAAAAATCCTGAACATATGCCACGTGTTGCAATGTATTGCACCGGAGGTATTCGATGTGAAAAAGCTTCAAGTTTGCTCCTCAGTCAAGGTTTCAAAGAGGTGTATCACTTGGAAGGTGGAATTCTGAAATATCTGGAGGAAGTGCCCAAAACAGAAAGCCTATGGCAGGGTGAGTGCTTTGTGTTTGACAAACGAGTCTCTGTGGAGCATGGTTTGGTGCAAGGAAATTTCAAGCTATGCTATGGTTGTAAGCAGCCTGTGAGTGATGCTGACATGGAAGCTCCGGAATTTGAATACGGAGTTTCTTGCCCTCATTGTTTTTCCCAGAAATCAGAGGAAGAGAAGGAGAGGGCACGAGCTAGGCAAAGACAGTTTGAGAGATGGGGAATCATAGGCGATCAATGTTGCGGTTGGTTGGCTCCTGCTGGCTCAAATAGTTCTCTCACAACATTCCGAATTAATTGA 1395 0.4789 MLRSWSTPPPLPLAPPRTPSSSSSSPSSSAARDSRRPSFLRSTPSTTRISLPPPPPLSSNSHPSPQRMTLSTSCFGASNPIPISGKPDLENQEPQSNDPQSLVVVSFYKFADFPAHANLRKPLKALCEELRVSGGIILAPEGTNGSICGTRESVEKVLAFIQSDNRLKGLRQVESPVSPEEEAIHHGHSAISPLAAGEDAPFRWDHVRVKLKKEIVTLGMPTVSPIERVGKHVSPRDWNTLISDPDIVVIDVRNDYETRIGKFKGAVDPRTTSFREFPSWVEDHFELTRNKGKPAIVEGNKSGESVEKDTKNPEHMPRVAMYCTGGIRCEKASSLLLSQGFKEVYHLEGGILKYLEEVPKTESLWQGECFVFDKRVSVEHGLVQGNFKLCYGCKQPVSDADMEAPEFEYGVSCPHCFSQKSEEEKERARARQRQFERWGIIGDQCCGWLAPAGSNSSLTTFRIN 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1066 464 Gene3D - 90 216 - -
Lele26g1066 464 Gene3D - 217 398 IPR036873 -
Lele26g1066 464 CDD RHOD_YceA 230 356 - -
Lele26g1066 464 SMART rhod_4 233 360 IPR001763 -
Lele26g1066 464 Pfam Rhodanese-like domain 240 356 IPR001763 -
Lele26g1066 464 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 212 389 IPR036873 -
Lele26g1066 464 MobiDBLite consensus disorder prediction 62 79 - -
Lele26g1066 464 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 91 432 IPR020936 -
Lele26g1066 464 Pfam UPF0176 acylphosphatase like domain 103 215 IPR040503 -
Lele26g1066 464 ProSiteProfiles Rhodanese domain profile. 243 363 IPR001763 -
Lele26g1066 464 MobiDBLite consensus disorder prediction 1 98 - -
Lele26g1066 464 Hamap tRNA uridine(34) hydroxylase [trhO]. 100 400 IPR020936 -
Lele26g1066 464 MobiDBLite consensus disorder prediction 20 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1066 Lele-ChrLele26 6890434 6894311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1066 90 442 Sulfurtransferasese or Rhodanese AT2G40760 75.824 0.0 569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1066 26 6890434 6894311 Lele27g1016 27 17808818 17812329 hybridization
Lele26g1066 26 6890434 6894311 Lele28g1059 28 6868321 6871053 hybridization