Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1058 ATGATGTTCAAGTCCTTAATTTCTGCATTTGTTTCCCTGAGCTTCTTACTATTCTTCTTCTCTGGCATAACTGTAGCTGATCTGAACTCTGATAGACAAGCTCTCTTAGAGTTTGCTTCCGGTGTCCCTCATGCCAGAAGACTCAACTGGAATTATTCTGTTCCAATTTGCACCTCATGGGTGGGTGTGACTTGCAACTTAGATAAAACTCGGGTCATTGCTATCCATCTTCCAGGAATTGGCCTCAAAGGTCACATTCCAGAAAGCAGCATAGGAAAACTAGATGCCCTTACAGTTCTGAGTCTTCACACCAATGGCCTTGATGGGAAGCTTCCTTCAGACATCCTTTCAATTCCTTCACTTGAGTATGTACATCTCCAGCAGAATAATTTCTCAGGTCCAATCCCTTCATCTGTCTCTCCTAAACTCATTGCACTTGATATTTCTCTCAACTCCTTCTCTGGCACTATCCCACCTACATTTGTCAATCTTAGAAGACTTACCTGGTTGTATTTTCAAAACAATTCCATCTCTGGACCTATCCCTGACTTCAACCTCCCAAAGCTCAAATTTCTTAATTTGAGTTATAATAACTTGAGTGGCTCAATTCCAAACTCCATCCAGAAATTTCCTCACACTTCTTTTCTTGGGAACTCTCTTTTGTGCGGGCCACCTCTGAATCATTGCTCTGCAATTACCCCTTCTGGATCTCCTCCTCCATCTGCTAACCATTCAGTCACTCCAGCAAGTACCCAAGGTCAAAAAGCTACCAACCCAAAGAAACGACTTGGATTGGCTTCTATACTTGCTCTGGTAATTGGGGGCTGCGCATTCCTAGCTCTCCTAGTTTTGGTAATCTCTTTGCGCTGTTGTAAGAAGAAAAACGGTCAAACCAGTGGCATACTGAAGGCAAAGGCAGCTTGTGCAGGAAAGAATGAGATTTCGAAGAGTTTTGGAAGTGGAGTACAAGAAGCTGAGAAGAACAAGTTGTTCTTCTTCAGAGGTTGCTCTTATACCTTTGACCTTGAGGATTTGCTAAAGGCCTCAGCTGAAGTTCTTGGAAAGGGAAGCTATGGAACAGCTTACAAGGCTGTTTTGGAGGAAGGAACAACAGTGGTGGTTAAGAGGTTGAGGGAAGTTGTGGTCGGAAAGAAGGAGTTTGAACAGCAGATGGATATTGTGGGCAGAGTAGGAAGCCACCCCAATATCTTGCCTCTTCAAGCTTATTACTATTCCAAAGATGAGAAACTTCTAGTTTGCAGCTTCATGCCACGCGGAAGCTTATTTGCCTCATTGCATGGAAAGAGGGGAGAAGGAAGAACTCGATTAGACTGGGATGCAAGAATGAAGGTCTCACTTGGAGTCGCCAAAGGAATCGCTTTCATACACTCCGAAGGGGGTCCAAAATTCACACACGGCAACATCAAGTCCACCAATGTCCTCCTAACCCAAGACCTCGATGGCTGCATCTCCGACGTCGGACTGCCTCCGCTGATGAGCACCCCGGCAACCATGTCCAGATCTAAAGGATACCGCGCGCCAGAGGTGACGGACGCCCGAAAGATCACCCACAAATCCGATGTGTACAGCTTCGGGGTGCTCCTCCTGGAAATGCTGACGGGGAAATGCCCGATGAGGTACCCTGGGCACGACGAAGTGGTGGATCTTCCGAGGTGGGTGAGGTCCGTGGTTCGAGAGGAATGGACGGCGGAAGTATTCGATGAGGAGCTATTGAGAGGGCGATATGTGGAAGAGGAAATGGTTCAGATGCTTCAGATTGCGCTGGCGTGCGTAGTGAAGACGCCGGATATGAGGCCGAGGATGGAGGAAGCGGTGAGAATGGTGGAGGAAATCAGGCAGCCGGAGTTGAAGAACCGGCCGTCCTCCGAGTCGGAGTCGAATTTGCAAACACCTTGA 1917 0.4731 MMFKSLISAFVSLSFLLFFFSGITVADLNSDRQALLEFASGVPHARRLNWNYSVPICTSWVGVTCNLDKTRVIAIHLPGIGLKGHIPESSIGKLDALTVLSLHTNGLDGKLPSDILSIPSLEYVHLQQNNFSGPIPSSVSPKLIALDISLNSFSGTIPPTFVNLRRLTWLYFQNNSISGPIPDFNLPKLKFLNLSYNNLSGSIPNSIQKFPHTSFLGNSLLCGPPLNHCSAITPSGSPPPSANHSVTPASTQGQKATNPKKRLGLASILALVIGGCAFLALLVLVISLRCCKKKNGQTSGILKAKAACAGKNEISKSFGSGVQEAEKNKLFFFRGCSYTFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLREVVVGKKEFEQQMDIVGRVGSHPNILPLQAYYYSKDEKLLVCSFMPRGSLFASLHGKRGEGRTRLDWDARMKVSLGVAKGIAFIHSEGGPKFTHGNIKSTNVLLTQDLDGCISDVGLPPLMSTPATMSRSKGYRAPEVTDARKITHKSDVYSFGVLLLEMLTGKCPMRYPGHDEVVDLPRWVRSVVREEWTAEVFDEELLRGRYVEEEMVQMLQIALACVVKTPDMRPRMEEAVRMVEEIRQPELKNRPSSESESNLQTP 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1058 638 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Lele26g1058 638 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 423 629 - -
Lele26g1058 638 MobiDBLite consensus disorder prediction 233 257 - -
Lele26g1058 638 SUPERFAMILY L domain-like 41 227 - -
Lele26g1058 638 Pfam Leucine Rich Repeat 188 210 IPR001611 GO:0005515
Lele26g1058 638 Gene3D Ribonuclease Inhibitor 28 184 IPR032675 -
Lele26g1058 638 FunFam pollen receptor-like kinase 1 315 422 - -
Lele26g1058 638 Pfam Protein kinase domain 351 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1058 638 FunFam Nuclear pore complex protein NUP107 28 183 - -
Lele26g1058 638 PANTHER OS05G0588300 PROTEIN 11 630 - -
Lele26g1058 638 Gene3D Ribonuclease Inhibitor 185 230 IPR032675 -
Lele26g1058 638 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1058 638 Gene3D Transferase(Phosphotransferase) domain 1 423 636 - -
Lele26g1058 638 Gene3D Phosphorylase Kinase; domain 1 313 422 - -
Lele26g1058 638 ProSitePatterns Protein kinases ATP-binding region signature. 353 384 IPR017441 GO:0005524
Lele26g1058 638 ProSiteProfiles Leucine-rich repeat profile. 188 210 IPR001611 GO:0005515
Lele26g1058 638 MobiDBLite consensus disorder prediction 618 638 - -
Lele26g1058 638 SUPERFAMILY Protein kinase-like (PK-like) 351 616 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1058 Lele-ChrLele26 6857675 6860012 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1058 6 633 Receptor kinase-like Gene Family AT5G58300 58.095 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele26g1058 Pkinase 5.6e-33 CL0016