Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1052 ATGTCTTTCTCATTGTTGCAGGCAAGTAAGAAGATAGCATATGCTAAACTTGCAAAAGATTTTCAGGTAGTTTTGAAAGAATTTCAGAAGGCACAACAGCTTGCAGCCACAAGGGAGACAACATACACTCCTTTCGTTTCACAAGCAAGTCTTCCTTCCAGTTATACAGCCAGTGAGGTGGATGTTAGTTCTAATAAGGCTGTAGAACAGGTGCTCTTCTTGTGGAATCCAGAAGGCCTCTGCTGTACTGTGCAAGAGGTGTTATTATTGGATAATGAGATTGCCTTCAATGAAGCTATAATTGAGGAACGTGAGCATGGCATTCAAGAAATCCAACAACAAATTGGTGAAGCAAGCGAGATTTTTAAAGATCTTGCTGTGCTTGTTCATGAGCAAGGAACCATGATTGATGATATTGGATCCAATGTTGAAGCCTCCCATGCGGCAACTTCAGAAGCAAAAACTCAACTTGGTCGTGCTTCTCATCGTGATCATAATTCTGGCTGCCTAGTCAAAGATTCTCGCAATTTAAATTATGAACCAGACCTGTATCTTCTGAAGAACAGATGGCCTCCACTGATTTTGCAAAGAAATGTTTTACTAGATTTCATGGTTGACTTGAGTTTGACATATCTAATGTTGTGTTTGGGTTATGAAGATGTGTCACCCTCCTCCTTGTGCAGTGGCTCTCTATTCTTTACAAAATAA 708 0.4025 MSFSLLQASKKIAYAKLAKDFQVVLKEFQKAQQLAATRETTYTPFVSQASLPSSYTASEVDVSSNKAVEQVLFLWNPEGLCCTVQEVLLLDNEIAFNEAIIEEREHGIQEIQQQIGEASEIFKDLAVLVHEQGTMIDDIGSNVEASHAATSEAKTQLGRASHRDHNSGCLVKDSRNLNYEPDLYLLKNRWPPLILQRNVLLDFMVDLSLTYLMLCLGYEDVSPSSLCSGSLFFTK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1052 235 Gene3D - 99 161 - -
Lele26g1052 235 CDD SNARE_Qa 101 157 - -
Lele26g1052 235 PANTHER SYNTAXIN 13 167 IPR045242 -
Lele26g1052 235 SMART tSNARE_6 93 160 IPR000727 -
Lele26g1052 235 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 98 160 IPR000727 -
Lele26g1052 235 Gene3D - 2 48 - -
Lele26g1052 235 SUPERFAMILY t-snare proteins 8 153 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1052 Lele-ChrLele26 6817076 6818791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1052 4 171 SNARE and Associated Proteins AT5G46860 62.500 1.37e-62 195