Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1048 ATGGAGCAACAGATTGAAAAAGAGAACTCTCGTTGGGGAGTACAGGAGGAAGAAGAAATGGAAGAGGCCACTTTGGAGGGAAGGAAATCCTTGCAGCGTTCCAAGGATGATAAAATGAATACGACCGGTGTGGCGGGAACATCTTCGTCTTCCCCACCGACTATAGAGAAAGAGAATGGAGTTTCAGAGAAGTATATTATTAGTGAACATAAACATCACTGTACTGATGAAGAAGTAAAGAACGCAGCAACAAGTGTAGATGCCATAACTCGAACTACTAGTTTTGTATGGCAGAATGGAGATATTGCTTCCTTTGACAATCAAGAAGATTCACAATCATCGCATTTACAGAATTCATCTGAATTGAACGCTGCAACTGTCCAACATTTAGAAGATGAAACCAGTCCAAAAGCAGATCCTGAGTTGATAGAAGATTTTGACCAGAGACTCAGAGAACTAGATGTTGAGGCAGTGTTGGCCAAGCAAGAGACCCATGATTTGTTTTGTCCTAATTGCAAGTCCTGCATTACCAAAAGGGTCATCCTCAGTAAGAGAAAACGCAGAGTTCAAGATTTAGATCCTAACCCAAAGCGTGACAAGTTTGATACTGTAGCTAGGGCCAAGCTGGTTGATGGTTCTGCATATGAAGCCAACCAAAGTGATGAAGAAATCACAACTAATATTGATAGAGAAGTGCCAACTTCTGATAGTTATAGTCAAGAAAGAGAACCAGAAGTATTCAGATTCTTATCATGCTTCAGATATTTTATTCCTACAGAGCTTGATAATCTGATTACTTTGGCAGAAAGTAGTTTCAATTTGTTCCGAAAATTTGTTGGTACTCATCAGCAAGAAAGTTCACAGAATTCTTTAAGTTTACCAGCATTTGACTCACAAGGGGAAGCATATGTGATCAGTGTGAATGAAATAGGTTTTCAGTGTTATTGTGATTTAGAGGTTCTCCATGTATCAGGTGATATGATACCAAAGCACGTGAGAGATCTTTCAGCAACTACAATTACTAGTGAAGCAGTTGTTAAAGCTGATGAACATGCAAAACATCCCACTCCAAAACCTTATGAAGAAGAAACTGAGAATTCAGAGAAGGATATATACAAGAAATCCAGTATAGCAACGGAAGATAAATTAAATATTCAGAATAGTTATCATCACTCATCAATGCAGGGTTCACAGGTACCTGCTCAGTCATTTTGCAGTGCAGAACTTGCAAAGAATGCAACTTCTGATATGCAAAGCATTGGTGGAGATGCTGAATATTTACCAGAACCAAATCTTACACTGGTTGAAAAAGAAAAAAAGGAAATTGAAGAAGAAAGAAATCCTCTGGTCGGAACAAAAAAGAAAGGGAGTAAGCGTGAGGTGATAGTGTTAGTTGAACCAGTTGAATGCATCACGATTCAAACAGAAGACAGTGTTCCAATTGAAGGTAGTATTTTGACAGAAACATCTGCTCAAGCTCAAGTACACAATGGTGAGCAAGCAGGAGATGAATTTGGTGAACCGTACGGATGGGAAATACTTAAAAGCATTGTGTATGGTGGCTTAATTGAATCAATTGCAAGTCTGGGAATTGTGACATCTGCAGTTAGTGCTGGTTCTTCTTCATTGAATATTATAGCCTTGGGATTAGCAAATGTGGTTGGTGGACTTTTCATCCTTGTTCATCATCTTATGGAATTGAAAGAAGATGATTCTGGAGGGGATACACAGCAAACAAACAAACAAGAAGATCGGTACCACAGATTGCTTGGTAGCCGAGAAAACCTCGTACTTCATGCAGTCGTCGCTGTTTTATCATTCCAAATATTCGGTGCTGTCCCTGTCGTTATTTATGGCATAGTGATCGGTGAAAATTACTCTTCGGAAGTGAAGGTTGCAGAGGTGGTAGCCGCTTCTCTGGTATGCATCATTCTGCTTGCAATTGGCAAGGTTTACACCAAAAGACCGCCTAAATCATACATCAAAACGCTGTCGTATTATTTTACCTTGGTGGTAGCAGCTTCGGGAGTGTCTTATGTATTGGGACAATTAATTAAGGATCTCATAGAGAAACTCATTTTTTGTCTGTTTTTGTTACAAACTCAGTGA 2109 0.3936 MEQQIEKENSRWGVQEEEEMEEATLEGRKSLQRSKDDKMNTTGVAGTSSSSPPTIEKENGVSEKYIISEHKHHCTDEEVKNAATSVDAITRTTSFVWQNGDIASFDNQEDSQSSHLQNSSELNAATVQHLEDETSPKADPELIEDFDQRLRELDVEAVLAKQETHDLFCPNCKSCITKRVILSKRKRRVQDLDPNPKRDKFDTVARAKLVDGSAYEANQSDEEITTNIDREVPTSDSYSQEREPEVFRFLSCFRYFIPTELDNLITLAESSFNLFRKFVGTHQQESSQNSLSLPAFDSQGEAYVISVNEIGFQCYCDLEVLHVSGDMIPKHVRDLSATTITSEAVVKADEHAKHPTPKPYEEETENSEKDIYKKSSIATEDKLNIQNSYHHSSMQGSQVPAQSFCSAELAKNATSDMQSIGGDAEYLPEPNLTLVEKEKKEIEEERNPLVGTKKKGSKREVIVLVEPVECITIQTEDSVPIEGSILTETSAQAQVHNGEQAGDEFGEPYGWEILKSIVYGGLIESIASLGIVTSAVSAGSSSLNIIALGLANVVGGLFILVHHLMELKEDDSGGDTQQTNKQEDRYHRLLGSRENLVLHAVVAVLSFQIFGAVPVVIYGIVIGENYSSEVKVAEVVAASLVCIILLAIGKVYTKRPPKSYIKTLSYYFTLVVAASGVSYVLGQLIKDLIEKLIFCLFLLQTQ 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1048 702 Coils Coil 143 163 - -
Lele26g1048 702 MobiDBLite consensus disorder prediction 37 57 - -
Lele26g1048 702 MobiDBLite consensus disorder prediction 349 368 - -
Lele26g1048 702 CDD CCC1_like 514 685 - -
Lele26g1048 702 PANTHER MEMBRANE PROTEIN OF ER BODY-LIKE PROTEIN 51 692 - -
Lele26g1048 702 MobiDBLite consensus disorder prediction 1 36 - -
Lele26g1048 702 MobiDBLite consensus disorder prediction 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1048 Lele-ChrLele26 6780426 6784664 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0138 01 812740 813890 Lele26g1048 26 6780426 6784664 CCT
Lele02g0138 02 787553 788681 Lele26g1048 26 6780426 6784664 CCT
Lele03g0145 03 776023 777823 Lele26g1048 26 6780426 6784664 CCT
Lele04g0136 04 782376 784210 Lele26g1048 26 6780426 6784664 CCT
Lele26g1048 26 6780426 6784664 Lele28g1039 28 6734758 6741752 hybridization