Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1047 ATGGAACGGAGCAGATCCCTGAGGGTGGTGGATAGAGAAGAAGATGATTTTGATGATGAAGACGATCAGATGATGAAGAGTAAGAGAGAAGTGAAAGCGTCGTCGTTCTTTAAACTGTTGAGTTATGCTGATGCAGTGGACTGGATTCTGATGGCGTTGGGGGCTCTGGGTTCTGTAGTTCATGGCATGGCTTTCCCTGTTGGCTATCTCTTGCTCGGAATAGCTCTTAATACTTTTGGCAGCAATATCAATGACAGTGACGCCATGGCTAGGGCTCTTAAAGAAAAGGTCGTTCCCTATGTGTGGTACATGTCCATCGCCACATTTCCTGCTGGGATACTTGAGACGGGGTGTTGGATGTATACAAGTGAAAGACAAGTGGCAAGGCTAAGATTAGCATACCTAAGAGCAGTACTAAGCCAAGAGATCGGAGCATTTGACACTGAATTAACAAGTGGCAAGATCATCAATGGAATCAGCAATCACATGAGTATCATACAAGATGCTATTGGCGAGAAGTTGGGTCACTTCACCTCATGCTTTGCAACTTTCTTCTCCGGACTTGTGATTGCTGCATATTGCACCTGGGAAATTGCACTTCTGTGTTTAGTGGTTGTTCCTCTTATTCTTCTTATAGGGGCCACTTATACCAAGAGAATGAACAACATTTCAACCACCAAAATGAATAACCTGTCTGAAGTCACTGCTATGATTGAACAGACAATATCACAAATAAAAACGGTATATGCATTTGTTGGGGAGAGCTCTGCAATAAAATCCTTCACAGAAAACATGGACAAACTTTATATTATAAGCAAAGGAGAGGCGCTTATAAAGGGAGTTGGAACAGGAATGTTCCAAACTGTAAGTTTTGTTTCATGGGCTCTCATTGTTTGGGTTGGAGCTGTTGTGGTCACTGCTCATAGAGCTTCTGGAGGAGACATTATTACTGCAGTCATGAGCATTCTCTTTGGTGCAATATATTTGACTTATGCTGCACCAGACATGCAAATATTCAATCAGGCCAAAGCAGCAGGATATGAGGTTTTCCAAGTGATCCAAAGAAAACCACTCATAAGTAATAATGAATCAGAAGGAAAGAAACCACAGAAGATCGAAGGCTCTATTGAAATACGCGATGTTCACTTTTCTTACCCATCACGCCCAGAGAAACCTATCCTTCAAGGATTTTCGTTGTCGATACCTGCAGGGAAGACAGTAGCATTAGTTGGTAGCAGTGGATGTGGAAAGAGTACTGTCATCTCCCTAGTTTCCAGATTTTATGAAGCCTCAAAAGGAGAAATTTTCATTGATCACCATAATATCAAGGATCTTGATTTGAAGTTCCTGAGAAGAAACATAGGAGCTGTTTCCCAAGAACCTTCACTTTTCACAGGAACCATCAAGGATAACTTGAAAGTGGGAAAAATCGATGCAAATGATCAAGAGATACAGAGTGCAGCAGAAATGTCAAATGCACACTCTTTCATATCACAACTTCCAGATCAGTACCTAACAGAGGTAGGACAAAGGGGGGTCCAATTATCAGGAGGCCAAAAACAAAGGATAGCAATAGCAAGGGCCATTCTAAAGAATCCACCAATTCTGTTGCTTGATGAAGCTACCAGTGCCCTAGACTCAGAATCAGAAAAGCTGGTTCAAGAGGCTCTTGAGAAAGCCGTGAGTGGAAGAACTGTTATCATGATTGCTCACAGGTTATCAACTGTGGTATATGCAGATATGATTGTTGTTGTGCAGAATGGACAAGTCTCAGAAATAGGAACTCATAACAGTTTGCTAGAAACAAGCCCATTCTATAACGCGCTATTCAACATGCAGAACCTTGAACCACTTCCTGAATCCAGACCATCAAGTTCAAAATATGAACTGTCAAGTATCGAAAAGGAAGAATCTTTTCAAGAGATTAGATCACAGGAGAAGCAACTTGAGATGCTAGAAATTCTGACCCAGAATTCAATGAAAGAGGAACAGAATAGCAGAAAAGAAACAAGTAAATTTTTCAGAATCTGGTATGGTCTGACAAAGAGAGAGCTTGCAAAGACAGCCATTGGCGCCTTTGCAGCAGCTTTTTCCGGCATATCGAAGCCAGTTTTTGGATTCTACATCATCACCATTGGAGTAGCATACTTTGGTCACGATGCAAAACGGAAAGTTGCATTGTATTCTATCATCTTCGCAGCAATAGGTTTACTTTCATTATTCAGTCACACCTTGCAGCATTACTTCTTTGGAATTATTGGAGAAAAGGCCATGGGAAATATCAGACGAGCTCTTTATTCAGGAGTGCTTCGTAACGAAGTTGGCTGGTTTGACAAACCTGAGAACAGTGTGGGTTCACTAACTTCACGGATTATAAGTGACACAGCAATGGTCAAAGTCATAATTGCTGATCGAATGTCTGTAATTCTCCAATGCATTTCCTCAGTATTGATAGCAACAGTGGTGAGCATGGTTGTTAACTGGAGAATGGGCTTAGTAGCTTGGGCAGTTATGCCTTGCCACTTAATAGGGGGTCTGGTTCAAGCCAAATCTGCTAAAGGATTCTCAGGAGACAACTCTGCTGCATATTCTGAACTTGTTGCTCTTACATCGGAGTCCACGACCAACATTAGGACTGTCGCATCATTTTGCCATGAAGAACATGTTTTGAGGAAAGCCAAAGCATCCTTAGACATCCCGAAGAAGAAGTATAGAATTGAAAGCATCAAATATGGGATCATTCAAGGCTTCTCTATTTTCTTATGGAACGTTGCACATGCTGTAGCTTTATGGTACACAGCAATTCTGGTCGAAAGACAACAAGCTTCATTTGAAAATGGCATAAGATCATACCAGATTTTTTCTCTCACTGTCCCTTCCATCACAGAGCTTTACACACTGATCCCTACTGTCATCTCTGCTATTAGTATACTTACACCTGCATTCCAAACCCTAGATCGTAAAACTGAAATTGAACCAGATACCCCAGAAGATATCGAGCCCAAGACAATACAAGGGAATATTGAATTTAAAGGAGTAAACTTTCACTATCCGTTGAGACCTGAGGTGACTGTTCTTGACAATTTCAGTTTGAAAATTAAAGCTGGATCAAAGGTGGCTTTTGTAGGGCCAAGTGGGGCTGGGAAATCCTCTGTTTTGGCCCTTTTACTCAGATTTTATGATCCAAGAGAGGGAAATGTATTCATTGATGGTAAAGACATAAAGGATTATAATCTGAGATGGTTAAGAAAACAGATAGGGTTGGTACAACAAGAGCCAATGCTTTTTAACTGCTCTATAAGAGAGAATATTTGCTATGGCAAAAATGAAGCTTCTGAAAGTGAAATAGTGGAGGTCTCCAGAGAAGCAAACATACATGAATTTGTGAGTAATCTACCAAATGGGTATAACACTGTGGTTGGGGAGAAAGGTTGCCAGCTTTCAGGAGGGCAAAAGCAGAGAATAGCAATTGCTAGAACATTGTTAAAGAAGCCTGCGATTTTGCTTCTTGATGAAGCAACAAGTGCTCTTGATGCAGAGTCTGAAAGAACAGTTATAAGTGCAATGAAGGCGATAAGTCCAAAGGGAGGGAGTGAGTTGCATTCAAGAACCACTCAGATCACAGTTGCTCATAGGCTTTCCACTGTAATAAACTCAGATACCATAATTGTGATGGAGAAAGGCAAAATCGTGGAGATGGGGTCCCACTCAACCTTGATAGAATCAGAAAGAGGGCTTTACTCAAGGCTATTCCGGTTGCAGAGTTTTGAAGAAAGCTGA 3780 0.4127 MERSRSLRVVDREEDDFDDEDDQMMKSKREVKASSFFKLLSYADAVDWILMALGALGSVVHGMAFPVGYLLLGIALNTFGSNINDSDAMARALKEKVVPYVWYMSIATFPAGILETGCWMYTSERQVARLRLAYLRAVLSQEIGAFDTELTSGKIINGISNHMSIIQDAIGEKLGHFTSCFATFFSGLVIAAYCTWEIALLCLVVVPLILLIGATYTKRMNNISTTKMNNLSEVTAMIEQTISQIKTVYAFVGESSAIKSFTENMDKLYIISKGEALIKGVGTGMFQTVSFVSWALIVWVGAVVVTAHRASGGDIITAVMSILFGAIYLTYAAPDMQIFNQAKAAGYEVFQVIQRKPLISNNESEGKKPQKIEGSIEIRDVHFSYPSRPEKPILQGFSLSIPAGKTVALVGSSGCGKSTVISLVSRFYEASKGEIFIDHHNIKDLDLKFLRRNIGAVSQEPSLFTGTIKDNLKVGKIDANDQEIQSAAEMSNAHSFISQLPDQYLTEVGQRGVQLSGGQKQRIAIARAILKNPPILLLDEATSALDSESEKLVQEALEKAVSGRTVIMIAHRLSTVVYADMIVVVQNGQVSEIGTHNSLLETSPFYNALFNMQNLEPLPESRPSSSKYELSSIEKEESFQEIRSQEKQLEMLEILTQNSMKEEQNSRKETSKFFRIWYGLTKRELAKTAIGAFAAAFSGISKPVFGFYIITIGVAYFGHDAKRKVALYSIIFAAIGLLSLFSHTLQHYFFGIIGEKAMGNIRRALYSGVLRNEVGWFDKPENSVGSLTSRIISDTAMVKVIIADRMSVILQCISSVLIATVVSMVVNWRMGLVAWAVMPCHLIGGLVQAKSAKGFSGDNSAAYSELVALTSESTTNIRTVASFCHEEHVLRKAKASLDIPKKKYRIESIKYGIIQGFSIFLWNVAHAVALWYTAILVERQQASFENGIRSYQIFSLTVPSITELYTLIPTVISAISILTPAFQTLDRKTEIEPDTPEDIEPKTIQGNIEFKGVNFHYPLRPEVTVLDNFSLKIKAGSKVAFVGPSGAGKSSVLALLLRFYDPREGNVFIDGKDIKDYNLRWLRKQIGLVQQEPMLFNCSIRENICYGKNEASESEIVEVSREANIHEFVSNLPNGYNTVVGEKGCQLSGGQKQRIAIARTLLKKPAILLLDEATSALDAESERTVISAMKAISPKGGSELHSRTTQITVAHRLSTVINSDTIIVMEKGKIVEMGSHSTLIESERGLYSRLFRLQSFEES 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1047 1259 Coils Coil 10 30 - -
Lele26g1047 1259 SUPERFAMILY ABC transporter transmembrane region 39 345 IPR036640 GO:0005524|GO:0016020
Lele26g1047 1259 SMART AAA_5 1035 1229 IPR003593 -
Lele26g1047 1259 SMART AAA_5 403 589 IPR003593 -
Lele26g1047 1259 ProSitePatterns ABC transporters family signature. 515 529 IPR017871 GO:0005524|GO:0016887
Lele26g1047 1259 Pfam ABC transporter transmembrane region 52 326 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele26g1047 1259 Pfam ABC transporter transmembrane region 690 952 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele26g1047 1259 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 376 612 IPR003439 GO:0005524
Lele26g1047 1259 Pfam ABC transporter 394 543 IPR003439 GO:0005524
Lele26g1047 1259 PANTHER ABC TRANSPORTER B FAMILY 19 612 - -
Lele26g1047 1259 Coils Coil 635 655 - -
Lele26g1047 1259 SUPERFAMILY ABC transporter transmembrane region 678 993 IPR036640 GO:0005524|GO:0016020
Lele26g1047 1259 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1008 1252 IPR003439 GO:0005524
Lele26g1047 1259 FunFam ABC transporter B family member 4 998 1259 - -
Lele26g1047 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 999 1254 IPR027417 -
Lele26g1047 1259 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 52 341 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele26g1047 1259 FunFam ABC transporter B family member 4 366 620 - -
Lele26g1047 1259 CDD ABC_MTABC3_MDL1_MDL2 1008 1254 - -
Lele26g1047 1259 CDD ABC_MTABC3_MDL1_MDL2 376 613 - -
Lele26g1047 1259 Pfam ABC transporter 1026 1175 IPR003439 GO:0005524
Lele26g1047 1259 Gene3D - 998 1258 IPR027417 -
Lele26g1047 1259 Gene3D ABC transporter type 1, transmembrane domain 38 970 IPR036640 GO:0005524|GO:0016020
Lele26g1047 1259 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 689 973 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele26g1047 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 613 IPR027417 -
Lele26g1047 1259 ProSitePatterns ABC transporters family signature. 1147 1161 IPR017871 GO:0005524|GO:0016887
Lele26g1047 1259 MobiDBLite consensus disorder prediction 1 21 - -
Lele26g1047 1259 Gene3D - 366 614 IPR027417 -
Lele26g1047 1259 CDD ABC_6TM_Pgp_ABCB1_D1_like 51 349 - -
Lele26g1047 1259 CDD ABC_6TM_Pgp_ABCB1_D2_like 680 991 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1047 Lele-ChrLele26 6771338 6777646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1047 28 1259 Calmodulin-binding Proteins AT2G36910 40.568 0.0 944