Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1013 ATGATGATGAATAATCCAGGCAATGCAAAACAAGTTGGCGACACGACCTATACGAAGATCTTCGTTGGAGGGTTGGCTTGGGAGACTAAAAGAGACTCTCTGGAACGCTATTTTGAGCAGTACGGGGAGATCTCTGAGGCTGTTGTTATCACTGACAGAAACACTGGAGCTTCCAAAGGCTATGGCTTCGTGACTTTCAAGGATCCTGAATCTGCAATGAGAGCTTGTCAGAATCCATATCCTTGGATTGATGCCCGGAGGGCTAATTGTAATCTTGCAGCTCTTGGTGCACGCAAATTCAACCCATCTTCTACCACAGGAGCTGAGAAATTCAACAATACCAATTCATGGGCTATGGGACCAATCCCATTTCAAGGCTCCTCTTCATATTACAATCAGCACACACCCCATTACACTTTTCCCTTTCCACCACCCTATAGGTATCCTGGTTATCCTCCTTCACAAGAAATCTATGCAATGAACTACTATAATGTTTATGGAGGGCAACAGGTCCCATTCCGATGGCGTCCTGCAATATACCAACCGTTTTATGGGGCGAGTAGTAATTCAATGAGATTGCCAGCAGAAGCAATGGCGAAGAAGACGACACAGTACTCTGATGTAGCCCCACCCCAGGAAATTTTCTCATTTGTTGGAGTTCCACCAGAACCTATTTCAATTCCTTCTTCAATACCCACCTCTGGTTCAGTATCAAGACTAGTGACAGCAACAGTTTCTGGAGCATCCCCTGAACACAAATCTTCTTCAGCTTAG 774 0.4509 MMMNNPGNAKQVGDTTYTKIFVGGLAWETKRDSLERYFEQYGEISEAVVITDRNTGASKGYGFVTFKDPESAMRACQNPYPWIDARRANCNLAALGARKFNPSSTTGAEKFNNTNSWAMGPIPFQGSSSYYNQHTPHYTFPFPPPYRYPGYPPSQEIYAMNYYNVYGGQQVPFRWRPAIYQPFYGASSNSMRLPAEAMAKKTTQYSDVAPPQEIFSFVGVPPEPISIPSSIPTSGSVSRLVTATVSGASPEHKSSSA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1013 257 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 18 95 IPR000504 GO:0003723
Lele26g1013 257 CDD RRM_RBM24_RBM38_like 18 93 - -
Lele26g1013 257 SMART rrm1_1 19 91 IPR000504 GO:0003723
Lele26g1013 257 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 20 77 IPR000504 GO:0003723
Lele26g1013 257 PANTHER BOULE-RELATED 10 219 IPR037366 -
Lele26g1013 257 SUPERFAMILY RNA-binding domain, RBD 17 105 IPR035979 GO:0003676
Lele26g1013 257 Gene3D - 2 108 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1013 Lele-ChrLele26 6597242 6598441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1013 14 94 C2H2 Transcription Factor Family AT2G19380 43.210 2.04e-15 73.6