Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1010 ATGCATGCATGCAGAAACATGGCGTCATTACATATTCCTCTCTCATTATTCCTAGTCCTAATTTCCCTCCAACTAATTCACTTTCATGGCATCCTCTGTGATGACAAAGATGCCCTTCTTTCATTCAAATCCCAAGTCGCTGACCCACAGAATTCTCTTTCTACCTGGAATTCTAATTCCTCCGTCTGCTCTTGGCATGGAGTCTCCTGCTCCTCCACAAACACCAACAGAGTTCAATCTCTTCGTCTACCAGGACTTGCCCTTTCTGGTAATCTACCCTCTTCACTCTTTAACCTCACTTCTTTACAATTTCTTGATCTTTCCAAAAATGCATTCCAGGGTCATCTTCCTTTGCAGCTCTCAAATCTTTCTAATCTTAATGTCATAAATTTAGCTGCAAATAATCTCAGTGGAACACTTCCTTCCCAATTATCCCTTCTGCACCAGCTTCAAGTTCTTGACTTCTCTTTGAATAATATCACTGGTCTAATCCCTCCTGAATTTGGAAACTTTTCCGCTCTCACTAATCTTTCCTTGGCAAGAAACCATTTCTCTGGAGAGATTCCCAGTGAGTTGGGAAATCTTCATAATCTTTCTCATCTTCAACTCTCTGAGAACTATTTCTCCGGGGATTTCCCCATTTCTATCTTCAACGTCTCTTCGTTGACCTTCTTATCTGTAACAAAAAATCATCTTTCAGGAAAATTACCACAACATATAGGCAATTCTCTTCCAAATCTCAGAAGTCTCTATCTGGCAAACAACAAATTTGGGGGTGTGATTCCTATTTCCATATCCAATGCTTCACAGCTCCAAGAAATCGATCTTGCTCACAATGAATTTCATGGAAACCTCCCCTTGTTCAGTAACATGAGAAATCTCACCAGGCTCGTTCTTAGTAGTAATAATCTCTCTTCTAGATCATCAGATAATTCCGAGTTCTTTGATTCCCTTAGAAACAGCCCAACGCTGAAAATTCTGATGATTGACACTAATCAGTTAGCAGGGGAGCTTCCAAAATCTATAGCAAATCTTTCAACCACTCTTGAACAATTTTGTGTATCCTACAACTTATTCAGTGGAAGCATCCCTCTGGGGATAGGAAAATTTCAAAACCTCGTGTCCCTATCTTTTGAAGTAAATCATTTCAGTGGGGAGATACCAGGAGACATACGAGCATTGAACAAACTTCAGAACCTTGATATGCACCAAAACCAGTTATCTGGAGCAATCCCAGACATGTTTGGTAATTTCACTCAACTATACATCCTCTTGTTGAACAATAACAAGTTGTTTGGCAGAATTCCCTCCAGCATTGTGCAGTGCCAAAGATTGAACCGTCTGAACCTTCAAATGAATAACCTTCATGGGACCATACCAGAGGGCATTTATAGGCTTTCTAGTTTAACCACCTTGTCCTTAGCAGGGAATACCCTACACGGCTCCCTTCCATTTGCAGTGAGTTCCATGCAGCAACTTCAGTACTTGGACTTGTCTAACAATCTTATGACCGGAGAAATTCCAGAAGACATAGATGGCTGCGCAAGCTTGCTGATGCTTCAATTGTCAAGAAACAACTTTAGTGGTCCAATACCAAGTACTTTGGGGAACTTAACATCATTGGAAACATTGGATCTATCTTCAAACAACCTCACAGGTACCATACCATCATCTTTGGAAAAGCTTCGGTATTTGGTGAAGTTGAATTTGTCTTTCAACCATTTGGAAGGGGAAGTTCCCCAGAAAGGTGTTTTTACGAACCTTACCCAGCTTAGCCTTCAAGAAAACAGCAAGCTTTGTAGCCTCAACAAAGAAGTTGCGGAAAGATTAAGGATCACTGTATGTGTCAAAGGTAAAAGGCACAACACTAGATTCTTCCTCCCTCTCATACTTGCAGTTACAGGTGCATCTATTTTATGCGTCTCCATCTTCTGCTTCGTGTGGATGAAATGCTTTCGAAAGAGGGATGATAAAACAAGTTTGTCAGTTTCTCCTGTCAAGGGAGTTCCACAACAAATATCCTTTTCCGATATTCGAACTGCCACAAACAACTTCGCATCTGAAAACTTGATAGGAGACGGTGGGTTTGGTTTTGTATACAAGGGTGTGTTCAGCATCAACCAACGTAAAACTACTCTTGCTGTGAAAGTACTCGACTTGAAACTGAGTAAGGCTTCTGAGAGTTTCGTTGCAGAGTGTGAAGCTTTGAAGAACGTCAGGCATAGGAACCTCGTGAAGCTCATCACTTCATGCTCAAGTATTGATTATAAAGGTGACGACTTTAAAGCTTTGGTGATGCAATTCATGACCCACGGTAATTTGGACACGTGGTTGTATCAAGTAGACGAAGTATCAGGGTCCACCTTGACATTCTTGCAGAGATTGAATATTGCTATAGATATTGCTAACGCTATGGAGTATTTACACCATGACTGTGACCCACCAGTAGTCCACTGCGATCTGAAACCTGGTAACGTCTTATTGGACGAAACTATGGTTGCCCATGTTGGAGATTTTGGACTTGCAAGGCTTCTTTCTCAGGATCTATTGGAGTCTGTCACTCTAGGACTGAAGGGTACCATCGGCTACATTCCACCAGAATACGGTGTTGGTGGCAAAGCTTCAACCTTGGGAGATGTGTATAGTTTTGGGATTTTAGTGCTGGAGATTTTCATAGGGAAAAGGCCAACGGATAAGATGTTCAATGAAGGTTTAAGCCTTGAAAAGTTTGCTGCGGCGGCAATGGAAGAGAATCAAATACTGAATGAAGTTGATCCAAAGCTTTTTAACGATTTTGAAAGGTCAACAACACAAAGCTCAAGCACTGGTTATCATAGTGATGAAGGCAGAAGTAGGAGTGACAACTATAATGGCAGTTTCACAGTGTGCCAGCGCAAAGCAGAGGAGTGCGTAGTTGCAGTGATAAGAGTTGGTTTGTGTTGTGCGGCTCAAGTGGACACAAATCGCTTGACCATGAGAGAGGCCCTGAAAAAGTTGCAGGCAATCAGGCACACTCTGCTGGCTATATAA 3030 0.4172 MHACRNMASLHIPLSLFLVLISLQLIHFHGILCDDKDALLSFKSQVADPQNSLSTWNSNSSVCSWHGVSCSSTNTNRVQSLRLPGLALSGNLPSSLFNLTSLQFLDLSKNAFQGHLPLQLSNLSNLNVINLAANNLSGTLPSQLSLLHQLQVLDFSLNNITGLIPPEFGNFSALTNLSLARNHFSGEIPSELGNLHNLSHLQLSENYFSGDFPISIFNVSSLTFLSVTKNHLSGKLPQHIGNSLPNLRSLYLANNKFGGVIPISISNASQLQEIDLAHNEFHGNLPLFSNMRNLTRLVLSSNNLSSRSSDNSEFFDSLRNSPTLKILMIDTNQLAGELPKSIANLSTTLEQFCVSYNLFSGSIPLGIGKFQNLVSLSFEVNHFSGEIPGDIRALNKLQNLDMHQNQLSGAIPDMFGNFTQLYILLLNNNKLFGRIPSSIVQCQRLNRLNLQMNNLHGTIPEGIYRLSSLTTLSLAGNTLHGSLPFAVSSMQQLQYLDLSNNLMTGEIPEDIDGCASLLMLQLSRNNFSGPIPSTLGNLTSLETLDLSSNNLTGTIPSSLEKLRYLVKLNLSFNHLEGEVPQKGVFTNLTQLSLQENSKLCSLNKEVAERLRITVCVKGKRHNTRFFLPLILAVTGASILCVSIFCFVWMKCFRKRDDKTSLSVSPVKGVPQQISFSDIRTATNNFASENLIGDGGFGFVYKGVFSINQRKTTLAVKVLDLKLSKASESFVAECEALKNVRHRNLVKLITSCSSIDYKGDDFKALVMQFMTHGNLDTWLYQVDEVSGSTLTFLQRLNIAIDIANAMEYLHHDCDPPVVHCDLKPGNVLLDETMVAHVGDFGLARLLSQDLLESVTLGLKGTIGYIPPEYGVGGKASTLGDVYSFGILVLEIFIGKRPTDKMFNEGLSLEKFAAAAMEENQILNEVDPKLFNDFERSTTQSSSTGYHSDEGRSRSDNYNGSFTVCQRKAEECVVAVIRVGLCCAAQVDTNRLTMREALKKLQAIRHTLLAI 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1010 1009 FunFam Leucine-rich repeat receptor protein kinase EMS1 212 310 - -
Lele26g1010 1009 PANTHER OS04G0122200 PROTEIN 193 1002 - -
Lele26g1010 1009 SUPERFAMILY Protein kinase-like (PK-like) 661 999 IPR011009 -
Lele26g1010 1009 SMART LRR_sd22_2 490 513 - -
Lele26g1010 1009 SMART LRR_sd22_2 244 270 - -
Lele26g1010 1009 SMART LRR_sd22_2 585 604 - -
Lele26g1010 1009 SMART LRR_sd22_2 147 179 - -
Lele26g1010 1009 SMART LRR_sd22_2 538 561 - -
Lele26g1010 1009 SMART LRR_sd22_2 99 125 - -
Lele26g1010 1009 SMART LRR_sd22_2 394 409 - -
Lele26g1010 1009 Gene3D Ribonuclease Inhibitor 287 609 IPR032675 -
Lele26g1010 1009 SUPERFAMILY L domain-like 348 603 - -
Lele26g1010 1009 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 769 1009 - -
Lele26g1010 1009 Gene3D Ribonuclease Inhibitor 189 286 IPR032675 -
Lele26g1010 1009 FunFam LRR receptor-like serine/threonine-protein kinase EFR 656 768 - -
Lele26g1010 1009 FunFam LRR receptor-like serine/threonine-protein kinase EFR 311 620 - -
Lele26g1010 1009 ProSiteProfiles Leucine-rich repeat profile. 540 563 IPR001611 GO:0005515
Lele26g1010 1009 Pfam Protein tyrosine and serine/threonine kinase 688 904 IPR001245 GO:0004672|GO:0006468
Lele26g1010 1009 ProSitePatterns Protein kinases ATP-binding region signature. 691 716 IPR017441 GO:0005524
Lele26g1010 1009 PRINTS Leucine-rich repeat signature 493 506 - -
Lele26g1010 1009 PRINTS Leucine-rich repeat signature 538 551 - -
Lele26g1010 1009 Gene3D Ribonuclease Inhibitor 33 188 IPR032675 -
Lele26g1010 1009 Pfam Leucine rich repeat 532 575 IPR001611 GO:0005515
Lele26g1010 1009 Pfam Leucine rich repeat 124 184 IPR001611 GO:0005515
Lele26g1010 1009 Pfam Leucine rich repeat 487 527 IPR001611 GO:0005515
Lele26g1010 1009 Gene3D Transferase(Phosphotransferase) domain 1 769 1007 - -
Lele26g1010 1009 SUPERFAMILY L domain-like 32 308 - -
Lele26g1010 1009 FunFam Leucine-rich repeat receptor-like protein kinase 33 189 - -
Lele26g1010 1009 ProSiteProfiles Protein kinase domain profile. 685 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1010 1009 SMART serkin_6 685 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele26g1010 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672|GO:0006468
Lele26g1010 1009 SMART LRR_typ_2 394 417 IPR003591 -
Lele26g1010 1009 SMART LRR_typ_2 490 514 IPR003591 -
Lele26g1010 1009 SMART LRR_typ_2 418 442 IPR003591 -
Lele26g1010 1009 SMART LRR_typ_2 171 195 IPR003591 -
Lele26g1010 1009 SMART LRR_typ_2 466 489 IPR003591 -
Lele26g1010 1009 SMART LRR_typ_2 99 123 IPR003591 -
Lele26g1010 1009 SMART LRR_typ_2 538 562 IPR003591 -
Lele26g1010 1009 SMART LRR_typ_2 147 170 IPR003591 -
Lele26g1010 1009 SMART LRR_typ_2 244 268 IPR003591 -
Lele26g1010 1009 SMART LRR_typ_2 291 317 IPR003591 -
Lele26g1010 1009 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Lele26g1010 1009 Gene3D Phosphorylase Kinase; domain 1 647 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1010 Lele-ChrLele26 6580113 6583218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1010 25 1004 Receptor kinase-like Gene Family AT3G47570 39.608 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele26g1010 PK_Tyr_Ser-Thr 1.2e-39 CL0016