Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0960 ATGGGGAAGAAGAGTGGGGGTGGTTGGTTCTCGTCGGTGAAGAAAGTTTTCAAGTCTTCGTCTAAGGACTCGCCGGTGCCAGAGAGGAAGAAGGAAGATGAATTGAAACGGCAACATGAAGCGCCCGAGGTTGTTTTGTTTGAGCATTTTCCTGCGGAGAGTTCTCCTGATGATATTACCAATGAGGAGAGTACTACATCGACACCTGTGATTGAAGATAGACGACATGCCGTTGCTGTTGCTGCAGCAACTGCTGCAGCTGCTGAGGCAGCAGGTGCAGCCGCTCAAGCAGCGGCAAGAGTTGTTCAGATGGCAGGTTATGGACATCAATCCGAGGAAGATAGAGCAGCAACAATCATTCAATCATACTACAGAGGCTACCTAGCTCGACGTGCACGGCGTGCTTTGAAGGGATTGGTGAGACTGCAAGCGCTTGTGAGAGGTCACAATGTGAGGAAGCAAGCGCAAATGACAATGCGTTGCATGCAAGCGTTGGTGAGAGTGCAGGGCAGAGTTAGAGCTCGCAGGCTCCAGCTGACTCATGACAAGCTTTACAAGAACGTGATGGAACATGATTTAGTGCCCATGAGTCCCTTGTACGAGCATGGCTGGGACAATTGGCGTCACAGTTTCCAGAGAATCAATCAAAGTGACTTGTGGAAACATGAAGATGCAATGAAGAAGGAGAGAGCTCTTGCTTACGCTTTTAACTATCAGCAACAGAACCTGTCCCCACAAGGAGGCCTGACTGTTCGTGAAGAAATGGAAGCATATTCCAATGAGCTTGAACAAGCCAAGCGGGGTTGGCACTGGTTAGAGAGTTGGATGTCCTCTCAACAACATCAAGCCAGGCACCTGGGGCCGCCTGAGACCTCTTATTACATGACCCACACTGCTACAACCACCACCGAAGATGACGTGTCTGAGAAGACGGTGGAAATGGACATTGTTGCCCCTCAAAGCTCAAGCAACACCATCATGGGCCAAGGCTTGCTTTTGGATTCAAGCCCAGTTTCCAATAGGCGGATCAATGACCTGCAGCCTCAGCCCAACGCTGGTGTGCCTAGCTATATGGCCCCAACCCAGTCTGCAAAGGCCAAGGTAAGGGGTCAGGGCCCGGTCAAGCCACATGGCTCTCCAGTGCCGCAGTGGAATTCTTCCACAAGGAAGGGCTCCGTTATTAGGCCGGGCTGTGATCCCTTGAGCTCAGGTGGAGGTTCCGCGAGTTACCTGTTTATGAGGAGCCCGGGCCTGAAAGTTAGTGGGGCCCGCCTACAGTCTAGACCGATCGCTGGTGGAAGCTCAGATTATGTTGGTACGGAGGATTGGACACTGCCTCTAGGAGCCCATGCTTGGGCATGA 1362 0.5198 MGKKSGGGWFSSVKKVFKSSSKDSPVPERKKEDELKRQHEAPEVVLFEHFPAESSPDDITNEESTTSTPVIEDRRHAVAVAAATAAAAEAAGAAAQAAARVVQMAGYGHQSEEDRAATIIQSYYRGYLARRARRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQGRVRARRLQLTHDKLYKNVMEHDLVPMSPLYEHGWDNWRHSFQRINQSDLWKHEDAMKKERALAYAFNYQQQNLSPQGGLTVREEMEAYSNELEQAKRGWHWLESWMSSQQHQARHLGPPETSYYMTHTATTTTEDDVSEKTVEMDIVAPQSSSNTIMGQGLLLDSSPVSNRRINDLQPQPNAGVPSYMAPTQSAKAKVRGQGPVKPHGSPVPQWNSSTRKGSVIRPGCDPLSSGGGSASYLFMRSPGLKVSGARLQSRPIAGGSSDYVGTEDWTLPLGAHAWA 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0960 453 PANTHER IQ-DOMAIN 5-RELATED 1 385 - -
Lele26g0960 453 Gene3D - 111 166 - -
Lele26g0960 453 Pfam Protein of unknown function (DUF4005) 345 374 IPR025064 -
Lele26g0960 453 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Lele26g0960 453 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Lele26g0960 453 MobiDBLite consensus disorder prediction 368 400 - -
Lele26g0960 453 Pfam IQ calmodulin-binding motif 140 155 IPR000048 GO:0005515
Lele26g0960 453 Pfam IQ calmodulin-binding motif 115 131 IPR000048 GO:0005515
Lele26g0960 453 MobiDBLite consensus disorder prediction 16 70 - -
Lele26g0960 453 MobiDBLite consensus disorder prediction 21 46 - -
Lele26g0960 453 SMART iq_5 112 133 IPR000048 GO:0005515
Lele26g0960 453 SMART iq_5 134 156 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0960 Lele-ChrLele26 6259224 6262791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0960 1 393 IQD Protein Family AT3G49260 51.395 8.75e-102 310