Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0953 ATGAACTACGACAGGCTCGAAGCCTCCCAACCAGGTGGCTCCTCCCGCCGCTCCGATGATCCCATTCCTCCCCCTGCCTCCTCCCGCAGCAAGAAGAAGCTCATCTTACTGTCGGCGGTCGCTCTTGTCTTGATTGTGGCTTCAGCTGTCTCCGCCGTGCTCCTTGTCGGCATCCAACGTCGGTCTTCGGGTCCAGACGAGTCGGGCACCGGCGGGAAGCCCACTCAGGCTATTTCACGCGCCTGCGGCAAAACTCGGTTCCCTTCCCTCTGCGTGAAGTCGCTCCTTGATTTCCCGGGTTCCGGAGCCGCTTCGGAGCAGGATCTCGTCCACATTTCGCTCAACATGACATTGCAGCGCCTGAGCAAAGCGTTCTATTCCTCCACCTCCATCTCCAACGTCCAGATGGATCCGCGTCAACGATCGGCTTATGAGGACTGCCTCGAGCTGCTCGAGGACTCCGTCGACGCGCTCATGCGCTCCCTCACCTCCGTCGTCCCAGGAGGCGGTGGCGGGTCCACCGGCGATGTGCTGACGTGGCTCAGCGGCGCACTCACGAATCAAGACACGTGCAGCGAGGGGTTCGGGGACACGAGCGGGACAGTGAAGGATCAGATGGCCAGTAACTTGAAGGACTTATCGGAGCTCATTAGCAACTGTCTGGCGATATACGCCGGGAGCGATGCGGGCAATGATTTCTCAGGGGTTCCGATACAGAACAAGAGAAGATTAATGGGAGACAATATTGACAATGGCGACATCTCATCGGGCGAATTCCCGACCTGGTTAAGCAAAAGAGACAGAAGATTGTTGAGCACGGGGGAACCGGCGATTCAAGCTGATATCGTCGTGTCGAAGGACGGGAGTGGAACCGTTAAGACCATAGCGGAGGCGATAAAGAAAGTGCCGGAGCACAGCAGCCACCGGATCATCGTGTACGTGAAGGCAGGAAGGTACGAAGAGGAAAATTTGAAGGTTGGGAGGAAGAAAACGAATGTGATGTTCGTAGGTGATGGGAAGGGCAAGACGGTCATCACGGGTGGCAAGAATTTTGCCCAAGGCACCACCACCTTCCACACTGCCTCCTTCGCTGCTTCTGGGGCTGGTTTTATTGCCAAGGACATGACATTCGAGAACTATGCGGGGCCCGGGAAGCACCAAGCGGTGGCCCTCCGTGTTGGAGCCGACCACGCGGTGGTGTACCGATGCAGCATCATCGGATACCAAGACACATGTTATGTCCACTCCAACCGTCAGTTCTTCAGGGAATGTGACATTTATGGCACTGTTGATTTCATCTTTGGTAACGCGGCCGTGGTTTTCCAAAACTGCAACCTCGTATCTCGAAAGCCCATGGCCCAACAAAAGAACACCATCACGGCCCAAAACCGAAAAGACCCGAATCAGAACACGGGTATTTCCATCCACAATTGTCGGATCCAAGCCGCTTCTGATCTGGAGGCCTCCAAGGGAAGCATCCCAACCTATCTGGGCCGTCCGTGGAAGATATACTCTAGAACAGTTTACATGCTATCCTCCATGGAGGATCACATCCATCCACGTGGATGGTTGGAGTGGAATGCCACATCTCCAGTAGACAAATTGTATTATGGAGAGTATATGAACAGTGGGCCAGGTGCAGCTGTTGGAGGCCGGGTCAAATGGCCCGGGTATCGTGTTATAACGTCGACGGTAGAGGCGAATAGGTTCACGGTGGCTCAATTCATAGCGGGGTCATCATGGTTGCCGTCAACGGGGGTGGCATTCGTCGGAGGACTATCTAACTGA 1788 0.5526 MNYDRLEASQPGGSSRRSDDPIPPPASSRSKKKLILLSAVALVLIVASAVSAVLLVGIQRRSSGPDESGTGGKPTQAISRACGKTRFPSLCVKSLLDFPGSGAASEQDLVHISLNMTLQRLSKAFYSSTSISNVQMDPRQRSAYEDCLELLEDSVDALMRSLTSVVPGGGGGSTGDVLTWLSGALTNQDTCSEGFGDTSGTVKDQMASNLKDLSELISNCLAIYAGSDAGNDFSGVPIQNKRRLMGDNIDNGDISSGEFPTWLSKRDRRLLSTGEPAIQADIVVSKDGSGTVKTIAEAIKKVPEHSSHRIIVYVKAGRYEEENLKVGRKKTNVMFVGDGKGKTVITGGKNFAQGTTTFHTASFAASGAGFIAKDMTFENYAGPGKHQAVALRVGADHAVVYRCSIIGYQDTCYVHSNRQFFRECDIYGTVDFIFGNAAVVFQNCNLVSRKPMAQQKNTITAQNRKDPNQNTGISIHNCRIQAASDLEASKGSIPTYLGRPWKIYSRTVYMLSSMEDHIHPRGWLEWNATSPVDKLYYGEYMNSGPGAAVGGRVKWPGYRVITSTVEANRFTVAQFIAGSSWLPSTGVAFVGGLSN 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0953 595 PANTHER PECTINESTERASE 46 583 - -
Lele26g0953 595 MobiDBLite consensus disorder prediction 1 28 - -
Lele26g0953 595 FunFam Pectinesterase 74 227 - -
Lele26g0953 595 Pfam Pectinesterase 281 578 IPR000070 GO:0030599|GO:0042545
Lele26g0953 595 ProSitePatterns Pectinesterase signature 2. 426 435 IPR033131 -
Lele26g0953 595 CDD PMEI-like_3 81 223 - -
Lele26g0953 595 FunFam Pectinesterase 275 593 - -
Lele26g0953 595 SUPERFAMILY Pectin lyase-like 277 592 IPR011050 -
Lele26g0953 595 SMART PMEI_2 73 223 IPR006501 GO:0004857
Lele26g0953 595 Pfam Plant invertase/pectin methylesterase inhibitor 77 223 IPR006501 GO:0004857
Lele26g0953 595 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 224 IPR035513 -
Lele26g0953 595 Gene3D - 275 593 IPR012334 -
Lele26g0953 595 TIGRFAM PME_inhib: pectinesterase inhibitor domain 49 224 IPR006501 GO:0004857
Lele26g0953 595 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 226 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0953 Lele-ChrLele26 6171987 6175189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0953 1 595 Carbohydrate Esterase AT5G53370 64.883 0.0 805