Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0948 ATGCGCGTGGGCTTTAGCTTTCTAAACCGTGTTTGTATTGGAGAAATGTATGCAGAGGCTGGCCTTCTTTTCCCGTATTTCCAGAATTTCTCCCAAGAACTTCAACAGCTTGAGGAGTACTGCAAAACCCACAAGACCAATGCTTCTATGAGTGACATTTTCAGCTCTTCTGCCATATCCCAGTATGATTTGGCGGCAGAGGGGGATCTGTTCAAGGCTCCTGAACCTATTAGCGAAGAACCAGTCATGGACCTGGATCCTGTGGCAGCAGCCATCTCAATGATATCATGTGGTGAAGATGTTGTCTCCTCACAGGGACTAAAATCCACAGACATCGATGCTCTTCAAAGCGAGCAACTTCTGAGTGAGGTATTCTACGAGTGCGAAAAGGATCTTTTAGAGAAGACTGCAATCAAGTCACCACTATGTGAGATTCTGGATATCAAGGTTCCTGTTCTCGATACAGATGAAAGTAAAATTCAAGTAAACAAACAAATTACCGACATTCCATTACCGAAAAGTGTCAGTTTGGGATGTTTGAGCTCAATTGACTGGATGCAAGGATCTGTAATCAAGCCTGCTTTTCTTGAATTCCCAGGAATAGATTTCAACGAGGTTTATGGCATGCGAAGGGCATTTAGCGAAGGAGATATTAAGGCTTTGAGTAATGGCAATGGTAATGTGAACGTCATTCAATCTTCTCTTGAGAGGCCCCTTGTTATCAGCAACTGTACCAGTGAGGAGCGCAGAGAAAAGCTCTCCAGATACAGGAACAAGAAGACCAAGAGAAATTTTGGCAGGAAAATCAAGTATGCTTGCCGGAAGGCTCTGGCCGATAGTCAACCCAGAATCCGAGGAAGATTCGCGAAGACAGAAGAATCGGAGGTCAAGAGGCAATGA 900 0.4444 MRVGFSFLNRVCIGEMYAEAGLLFPYFQNFSQELQQLEEYCKTHKTNASMSDIFSSSAISQYDLAAEGDLFKAPEPISEEPVMDLDPVAAAISMISCGEDVVSSQGLKSTDIDALQSEQLLSEVFYECEKDLLEKTAIKSPLCEILDIKVPVLDTDESKIQVNKQITDIPLPKSVSLGCLSSIDWMQGSVIKPAFLEFPGIDFNEVYGMRRAFSEGDIKALSNGNGNVNVIQSSLERPLVISNCTSEERREKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESEVKRQ 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0948 299 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 208 292 IPR045281 GO:0009909
Lele26g0948 299 Pfam CCT motif 249 291 IPR010402 GO:0005515
Lele26g0948 299 ProSiteProfiles CCT domain profile. 249 291 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0948 Lele-ChrLele26 6129473 6134080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0948 225 295 C2C2-CO-like Transcription Factor Family AT5G57660 42.308 7.81e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele26g0948 CCT 8.2e-17 CL0281